STRINGSTRING
psmd13 psmd13 orc4 orc4 LOC101157953 LOC101157953 mcm7 mcm7 skp1 skp1 psma1 psma1 psmb4 psmb4 psma4 psma4 psmd8 psmd8 cul1 cul1 mcm2 mcm2 ccna1 ccna1 psmd14 psmd14 psmd5 psmd5 psmc5 psmc5 psmd9 psmd9 psma2 psma2 psme1 psme1 psmb9 psmb9 psmb9-like psmb9-like psmd1 psmd1 psmd6 psmd6 uba52 uba52 LOC101155046 LOC101155046 LOC101173089 LOC101173089 psmb2 psmb2 H2M2L4_ORYLA H2M2L4_ORYLA psma3 psma3 psmd7 psmd7 mcm5 mcm5 kxd1 kxd1 psmc3 psmc3 psmb1 psmb1 mcm6 mcm6 orc2 orc2 H2M970_ORYLA H2M970_ORYLA ubc ubc skp2 skp2 psme2 psme2 H2MG95_ORYLA H2MG95_ORYLA orc3 orc3 psmc6 psmc6 mcm9 mcm9 psmc1 psmc1 orc5 orc5 psma5 psma5 mcm3 mcm3 psmc4 psmc4 psmf1 psmf1 LOC101158678 LOC101158678 LOC101174330 LOC101174330 ccna2 ccna2 psme3 psme3 LOC111948194 LOC111948194 cdk2 cdk2 psmc2 psmc2 orc1 orc1 psmd12 psmd12 ENSORLP00000033333 ENSORLP00000033333 psmd10 psmd10 psma8 psma8 psme4 psme4 cdt1 cdt1 psmb3 psmb3 mcm8 mcm8 cdc6 cdc6 LOC111949049 LOC111949049 rps27a rps27a psmb7 psmb7 ENSORLP00000038704 ENSORLP00000038704 LOC101174707 LOC101174707 mcm4 mcm4 psmd3 psmd3 LOC101162259 LOC101162259 psmb8 psmb8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
psmd13Proteasome 26S subunit, non-ATPase 13. (378 aa)
orc4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (433 aa)
LOC101157953Proteasome 26S subunit, non-ATPase 4a. (372 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (727 aa)
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
psma1Proteasome endopeptidase complex. (238 aa)
psmb4Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
psma4Proteasome subunit alpha type. (261 aa)
psmd8Proteasome 26S subunit, non-ATPase 8. (265 aa)
cul1Cullin 1b; Belongs to the cullin family. (801 aa)
mcm2DNA helicase; Belongs to the MCM family. (888 aa)
ccna1Cyclin A1; Belongs to the cyclin family. (413 aa)
psmd14Proteasome 26S subunit, non-ATPase 14. (325 aa)
psmd5Proteasome 26S subunit, non-ATPase 5. (524 aa)
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
psmd9Proteasome 26S subunit, non-ATPase 9. (212 aa)
psma2Proteasome subunit alpha type. (234 aa)
psme1Proteasome activator subunit 1. (250 aa)
psmb9Proteasome subunit beta type-9; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides (By similarity). (216 aa)
psmb9-likeProteasome subunit, beta type 9-like. (217 aa)
psmd126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
psmd6Proteasome 26S subunit, non-ATPase 6. (389 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC101155046Proteasome subunit alpha type. (246 aa)
LOC101173089Proteasome 26S subunit, non-ATPase 4b. (376 aa)
psmb2Proteasome subunit beta. (199 aa)
H2M2L4_ORYLABLM10_mid domain-containing protein. (567 aa)
psma3Proteasome subunit alpha type. (255 aa)
psmd7Proteasome 26S subunit, non-ATPase 7. (324 aa)
mcm5DNA helicase; Belongs to the MCM family. (751 aa)
kxd1KxDL motif containing 1. (184 aa)
psmc3Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family. (427 aa)
psmb1Proteasome subunit beta. (237 aa)
mcm6DNA helicase; Belongs to the MCM family. (819 aa)
orc2Origin recognition complex, subunit 2. (591 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ubcUbiquitin B. (782 aa)
skp2S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (421 aa)
psme2Proteasome activator subunit 2. (241 aa)
H2MG95_ORYLARing-box 1, E3 ubiquitin protein ligase. (82 aa)
orc3Origin recognition complex, subunit 3. (719 aa)
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
mcm9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1116 aa)
psmc1Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (443 aa)
orc5Origin recognition complex, subunit 5. (441 aa)
psma5Proteasome subunit alpha type. (241 aa)
mcm3DNA helicase; Belongs to the MCM family. (817 aa)
psmc4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
psmf1Uncharacterized protein. (271 aa)
LOC101158678Proteasome subunit beta. (278 aa)
LOC101174330PCI domain-containing protein. (468 aa)
ccna2Cyclin A2; Belongs to the cyclin family. (429 aa)
psme3Proteasome activator subunit 3. (256 aa)
LOC111948194Proteasome subunit beta. (275 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
psmc2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (911 aa)
psmd12Proteasome 26S subunit, non-ATPase 12. (457 aa)
ENSORLP00000033333Proteasome subunit beta. (293 aa)
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)
psma8Proteasome subunit alpha type. (251 aa)
psme4Proteasome activator subunit 4a. (1848 aa)
cdt1Chromatin licensing and DNA replication factor 1. (607 aa)
psmb3Proteasome subunit beta 3. (223 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (846 aa)
cdc6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (568 aa)
LOC111949049Proteasome subunit beta. (276 aa)
rps27aRibosomal protein S27a. (195 aa)
psmb7Proteasome subunit beta. (286 aa)
ENSORLP00000038704DUF3437 domain-containing protein. (311 aa)
LOC101174707Proteasome 26S subunit, non-ATPase 11b. (422 aa)
mcm4DNA helicase; Belongs to the MCM family. (835 aa)
psmd3Proteasome 26S subunit, non-ATPase 3. (516 aa)
LOC101162259Proteasome endopeptidase complex. (320 aa)
psmb8Proteasome subunit beta. (275 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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