STRINGSTRING
skp2 skp2 psmd13 psmd13 LOC101166216 LOC101166216 ccnd1 ccnd1 LOC101157953 LOC101157953 skp1 skp1 wee1 wee1 H2L6D0_ORYLA H2L6D0_ORYLA psma1 psma1 psmb4 psmb4 LOC101174244 LOC101174244 psma4 psma4 psmd8 psmd8 rbbp8nl rbbp8nl cul1 cul1 ccna1 ccna1 psmd14 psmd14 LOC101174851 LOC101174851 psmd5 psmd5 psmc5 psmc5 psmd9 psmd9 psma2 psma2 psme1 psme1 psmb9 psmb9 psmb9-like psmb9-like psmd1 psmd1 psmd6 psmd6 uba52 uba52 LOC101155046 LOC101155046 psmd2 psmd2 LOC101173089 LOC101173089 psmb2 psmb2 ccnh ccnh psma3 psma3 psmd7 psmd7 kxd1 kxd1 psmc3 psmc3 psmb1 psmb1 H2M970_ORYLA H2M970_ORYLA ubc ubc psme2 psme2 LOC101155451 LOC101155451 LOC101175566 LOC101175566 ccne2 ccne2 psmc6 psmc6 ccne1 ccne1 psmc1 psmc1 LOC101156733 LOC101156733 psma5 psma5 LOC101159588 LOC101159588 psmc4 psmc4 akt1 akt1 psmf1 psmf1 cdc25b cdc25b LOC101158678 LOC101158678 LOC101174330 LOC101174330 ccna2 ccna2 LOC101169671 LOC101169671 psme3 psme3 LOC111948194 LOC111948194 cdk2 cdk2 LOC110014991 LOC110014991 psmc2 psmc2 LOC101160207 LOC101160207 psmd12 psmd12 cdkn1b cdkn1b psmd10 psmd10 LOC101162468 LOC101162468 psmb3 psmb3 rb1 rb1 LOC111949049 LOC111949049 rps27a rps27a cdkn1c cdkn1c psmb7 psmb7 cdk4 cdk4 ENSORLP00000039885 ENSORLP00000039885 LOC101174707 LOC101174707 cdk7 cdk7 mnat1 mnat1 psmd3 psmd3 cables1 cables1 LOC101162259 LOC101162259 ENSORLP00000045038 ENSORLP00000045038 psmb8 psmb8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
skp2S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (421 aa)
psmd13Proteasome 26S subunit, non-ATPase 13. (378 aa)
LOC101166216Cyclin-dependent kinase inhibitor 1A. (156 aa)
ccnd1Cyclin D1; Belongs to the cyclin family. (292 aa)
LOC101157953Proteasome 26S subunit, non-ATPase 4a. (372 aa)
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
wee1Wee1-like protein kinase. (622 aa)
H2L6D0_ORYLAUncharacterized protein. (176 aa)
psma1Proteasome endopeptidase complex. (238 aa)
psmb4Proteasome subunit beta; Belongs to the peptidase T1B family. (259 aa)
LOC101174244Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
psma4Proteasome subunit alpha type. (261 aa)
psmd8Proteasome 26S subunit, non-ATPase 8. (265 aa)
rbbp8nlRetinoblastoma binding protein 8-like. (568 aa)
cul1Cullin 1b; Belongs to the cullin family. (801 aa)
ccna1Cyclin A1; Belongs to the cyclin family. (413 aa)
psmd14Proteasome 26S subunit, non-ATPase 14. (325 aa)
LOC101174851Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
psmd5Proteasome 26S subunit, non-ATPase 5. (524 aa)
psmc5Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
psmd9Proteasome 26S subunit, non-ATPase 9. (212 aa)
psma2Proteasome subunit alpha type. (234 aa)
psme1Proteasome activator subunit 1. (250 aa)
psmb9Proteasome subunit beta type-9; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides (By similarity). (216 aa)
psmb9-likeProteasome subunit, beta type 9-like. (217 aa)
psmd126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
psmd6Proteasome 26S subunit, non-ATPase 6. (389 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC101155046Proteasome subunit alpha type. (246 aa)
psmd226S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (906 aa)
LOC101173089Proteasome 26S subunit, non-ATPase 4b. (376 aa)
psmb2Proteasome subunit beta. (199 aa)
ccnhCyclin H; Belongs to the cyclin family. (386 aa)
psma3Proteasome subunit alpha type. (255 aa)
psmd7Proteasome 26S subunit, non-ATPase 7. (324 aa)
kxd1KxDL motif containing 1. (184 aa)
psmc3Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family. (427 aa)
psmb1Proteasome subunit beta. (237 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ubcUbiquitin B. (782 aa)
psme2Proteasome activator subunit 2. (241 aa)
LOC101155451Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (482 aa)
LOC101175566Cdk5 and Abl enzyme substrate 2a; Belongs to the cyclin family. (567 aa)
ccne2Cyclin E2; Belongs to the cyclin family. (393 aa)
psmc6Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
ccne1Cyclin E1; Belongs to the cyclin family. (416 aa)
psmc1Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (443 aa)
LOC101156733Wee1-like protein kinase. (569 aa)
psma5Proteasome subunit alpha type. (241 aa)
LOC101159588Cdk5 and Abl enzyme substrate 2b; Belongs to the cyclin family. (533 aa)
psmc4Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (417 aa)
akt1Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (496 aa)
psmf1Uncharacterized protein. (271 aa)
cdc25bRhodanese domain-containing protein. (572 aa)
LOC101158678Proteasome subunit beta. (278 aa)
LOC101174330PCI domain-containing protein. (468 aa)
ccna2Cyclin A2; Belongs to the cyclin family. (429 aa)
LOC101169671Tyrosine-protein kinase. (500 aa)
psme3Proteasome activator subunit 3. (256 aa)
LOC111948194Proteasome subunit beta. (275 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
LOC110014991Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (76 aa)
psmc2Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
LOC101160207Uncharacterized protein. (317 aa)
psmd12Proteasome 26S subunit, non-ATPase 12. (457 aa)
cdkn1bCyclin-dependent kinase inhibitor 1Bb. (180 aa)
psmd10Proteasome 26S subunit, non-ATPase 10. (226 aa)
LOC101162468Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
psmb3Proteasome subunit beta 3. (223 aa)
rb1Retinoblastoma 1. (916 aa)
LOC111949049Proteasome subunit beta. (276 aa)
rps27aRibosomal protein S27a. (195 aa)
cdkn1cUncharacterized protein. (210 aa)
psmb7Proteasome subunit beta. (286 aa)
cdk4Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily. (330 aa)
ENSORLP00000039885Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (107 aa)
LOC101174707Proteasome 26S subunit, non-ATPase 11b. (422 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (391 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
psmd3Proteasome 26S subunit, non-ATPase 3. (516 aa)
cables1Cdk5 and Abl enzyme substrate 1. (526 aa)
LOC101162259Proteasome endopeptidase complex. (320 aa)
ENSORLP00000045038Uncharacterized protein. (178 aa)
psmb8Proteasome subunit beta. (275 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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