13 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101163402	Ribosomal protein S6 kinase. (746 aa)
	LOC101158674	cAMP responsive element binding protein 1. (315 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	LOC101159747	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (389 aa)
	grb2	Growth factor receptor-bound protein 2b. (218 aa)
	LOC101169648	Ribosomal protein S6 kinase. (748 aa)
	LOC101157651	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (1127 aa)
	LOC101154954	Zgc:55558. (189 aa)
	LOC101164105	cAMP responsive element binding protein 1b. (329 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (875 aa)
	LOC101162905	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
	LOC101157884	BZIP domain-containing protein. (177 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	LOC101157651	ENSORLP00000034821	ENSORLP00000029100	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
CSDE1	LOC101159747	ENSORLP00000034821	ENSORLP00000015020	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
CSDE1	LOC101162905	ENSORLP00000034821	ENSORLP00000039541	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
CSDE1	grb2	ENSORLP00000034821	ENSORLP00000019097	Cold shock domain containing E1, RNA-binding.	Growth factor receptor-bound protein 2b.	0.691
LOC101154954	LOC101157651	ENSORLP00000030026	ENSORLP00000029100	Zgc:55558.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
LOC101154954	LOC101159747	ENSORLP00000030026	ENSORLP00000015020	Zgc:55558.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
LOC101154954	LOC101162905	ENSORLP00000030026	ENSORLP00000039541	Zgc:55558.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.459
LOC101154954	grb2	ENSORLP00000030026	ENSORLP00000019097	Zgc:55558.	Growth factor receptor-bound protein 2b.	0.691
LOC101154954	hras	ENSORLP00000030026	ENSORLP00000014318	Zgc:55558.	HRas proto-oncogene, GTPase a.	0.911
LOC101154954	kras	ENSORLP00000030026	ENSORLP00000031976	Zgc:55558.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.901
LOC101157651	CSDE1	ENSORLP00000029100	ENSORLP00000034821	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Cold shock domain containing E1, RNA-binding.	0.459
LOC101157651	LOC101154954	ENSORLP00000029100	ENSORLP00000030026	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Zgc:55558.	0.459
LOC101157651	LOC101163402	ENSORLP00000029100	ENSORLP00000044991	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ribosomal protein S6 kinase.	0.628
LOC101157651	LOC101169648	ENSORLP00000029100	ENSORLP00000028532	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Ribosomal protein S6 kinase.	0.628
LOC101157651	grb2	ENSORLP00000029100	ENSORLP00000019097	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	Growth factor receptor-bound protein 2b.	0.456
LOC101157651	hras	ENSORLP00000029100	ENSORLP00000014318	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	HRas proto-oncogene, GTPase a.	0.459
LOC101157651	kras	ENSORLP00000029100	ENSORLP00000031976	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.459
LOC101157884	LOC101158674	ENSORLP00000045455	ENSORLP00000002934	BZIP domain-containing protein.	cAMP responsive element binding protein 1.	0.551
LOC101157884	LOC101163402	ENSORLP00000045455	ENSORLP00000044991	BZIP domain-containing protein.	Ribosomal protein S6 kinase.	0.489
LOC101157884	LOC101164105	ENSORLP00000045455	ENSORLP00000030602	BZIP domain-containing protein.	cAMP responsive element binding protein 1b.	0.549