29 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110016423	Uncharacterized protein. (313 aa)
	pik3r3	Phosphoinositide-3-kinase, regulatory subunit 3b (gamma). (719 aa)
	pik3cb	Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta; Belongs to the PI3/PI4-kinase family. (1078 aa)
	syk	Tyrosine-protein kinase. (624 aa)
	rps27a	Ribosomal protein S27a. (195 aa)
	LOC101167011	Tyrosine-protein kinase. (526 aa)
	pik3cd	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1039 aa)
	LOC101158476	Cbl proto-oncogene C, E3 ubiquitin protein ligase. (557 aa)
	LOC101158464	Rap guanine nucleotide exchange factor (GEF) 1b. (1184 aa)
	LOC101157019	Tyrosine-protein kinase. (537 aa)
	LOC101163728	Uncharacterized protein. (409 aa)
	LOC101162321	Tyrosine-protein kinase. (547 aa)
	H2MSU3_ORYLA	Uncharacterized protein. (420 aa)
	rapgef1	Uncharacterized protein. (881 aa)
	blk	Tyrosine-protein kinase. (484 aa)
	grb2	Growth factor receptor-bound protein 2b. (218 aa)
	LOC101163758	Uncharacterized protein. (852 aa)
	ubc	Ubiquitin B. (782 aa)
	H2M970_ORYLA	Ubiquitin-like domain-containing protein. (129 aa)
	YES1	Tyrosine-protein kinase. (550 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (306 aa)
	LOC101155144	Uncharacterized protein. (466 aa)
	crk	CRK proto-oncogene, adaptor protein. (315 aa)
	LOC101168152	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	PIK3CA	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	cbl	Cbl proto-oncogene, E3 ubiquitin protein ligase. (946 aa)
	pik3r1	Phosphoinositide-3-kinase, regulatory subunit 1 (alpha). (728 aa)
	hck	Tyrosine-protein kinase. (504 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2M970_ORYLA	LOC101158476	ENSORLP00000015051	ENSORLP00000044381	Ubiquitin-like domain-containing protein.	Cbl proto-oncogene C, E3 ubiquitin protein ligase.	0.650
H2M970_ORYLA	LOC101163758	ENSORLP00000015051	ENSORLP00000018205	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.650
H2M970_ORYLA	cbl	ENSORLP00000015051	ENSORLP00000009540	Ubiquitin-like domain-containing protein.	Cbl proto-oncogene, E3 ubiquitin protein ligase.	0.650
H2M970_ORYLA	grb2	ENSORLP00000015051	ENSORLP00000019097	Ubiquitin-like domain-containing protein.	Growth factor receptor-bound protein 2b.	0.612
H2M970_ORYLA	rps27a	ENSORLP00000015051	ENSORLP00000038189	Ubiquitin-like domain-containing protein.	Ribosomal protein S27a.	0.992
H2M970_ORYLA	syk	ENSORLP00000015051	ENSORLP00000036465	Ubiquitin-like domain-containing protein.	Tyrosine-protein kinase.	0.543
H2M970_ORYLA	uba52	ENSORLP00000015051	ENSORLP00000010731	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.552
H2M970_ORYLA	ubc	ENSORLP00000015051	ENSORLP00000015065	Ubiquitin-like domain-containing protein.	Ubiquitin B.	0.960
H2MSU3_ORYLA	LOC101155144	ENSORLP00000021836	ENSORLP00000013359	Uncharacterized protein.	Uncharacterized protein.	0.902
H2MSU3_ORYLA	LOC101157019	ENSORLP00000021836	ENSORLP00000029844	Uncharacterized protein.	Tyrosine-protein kinase.	0.407
H2MSU3_ORYLA	LOC101158476	ENSORLP00000021836	ENSORLP00000044381	Uncharacterized protein.	Cbl proto-oncogene C, E3 ubiquitin protein ligase.	0.627
H2MSU3_ORYLA	LOC101163728	ENSORLP00000021836	ENSORLP00000026102	Uncharacterized protein.	Uncharacterized protein.	0.902
H2MSU3_ORYLA	LOC101163758	ENSORLP00000021836	ENSORLP00000018205	Uncharacterized protein.	Uncharacterized protein.	0.627
H2MSU3_ORYLA	LOC101167011	ENSORLP00000021836	ENSORLP00000041511	Uncharacterized protein.	Tyrosine-protein kinase.	0.407
H2MSU3_ORYLA	LOC101168152	ENSORLP00000021836	ENSORLP00000011212	Uncharacterized protein.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.970
H2MSU3_ORYLA	PIK3CA	ENSORLP00000021836	ENSORLP00000011211	Uncharacterized protein.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.970
H2MSU3_ORYLA	cbl	ENSORLP00000021836	ENSORLP00000009540	Uncharacterized protein.	Cbl proto-oncogene, E3 ubiquitin protein ligase.	0.627
H2MSU3_ORYLA	grb2	ENSORLP00000021836	ENSORLP00000019097	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.826
H2MSU3_ORYLA	pik3cb	ENSORLP00000021836	ENSORLP00000034377	Uncharacterized protein.	Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta; Belongs to the PI3/PI4-kinase family.	0.970
H2MSU3_ORYLA	pik3cd	ENSORLP00000021836	ENSORLP00000044093	Uncharacterized protein.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.970