STRINGSTRING
LOC101167538 LOC101167538 ENSORLP00000043694 ENSORLP00000043694 hdac6 hdac6 LOC101166121 LOC101166121 LOC101168810 LOC101168810 ift88 ift88 LOC101160296 LOC101160296 rps27a rps27a ENSORLP00000037597 ENSORLP00000037597 LOC101170318 LOC101170318 ENSORLP00000036119 ENSORLP00000036119 DYNC1I1 DYNC1I1 LOC101155224 LOC101155224 vim vim LOC101174042 LOC101174042 cftr cftr LOC101162245 LOC101162245 LOC105354455 LOC105354455 H2MNV5_ORYLA H2MNV5_ORYLA LOC101168255 LOC101168255 dync1i2 dync1i2 LOC101166346 LOC101166346 pofut2 pofut2 LOC101159587 LOC101159587 LOC101155351 LOC101155351 LOC101158306 LOC101158306 LOC111946865 LOC111946865 LOC101157969 LOC101157969 ubc ubc H2M970_ORYLA H2M970_ORYLA ube2n ube2n kxd1 kxd1 uba52 uba52 LOC101164232 LOC101164232 arl13b arl13b dync1li2 dync1li2 LOC101162462 LOC101162462 park7 park7 LOC101164165 LOC101164165 H2LEF2_ORYLA H2LEF2_ORYLA LOC101171518 LOC101171518 LOC101171417 LOC101171417 cetn3 cetn3 LOC101166777 LOC101166777 prkn prkn tube1 tube1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101167538Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (457 aa)
ENSORLP00000043694Tubulin domain-containing protein; Belongs to the tubulin family. (333 aa)
hdac6Histone deacetylase 6. (1073 aa)
LOC101166121Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (473 aa)
LOC101168810Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
ift88Intraflagellar transport 88 homolog. (855 aa)
LOC101160296Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
rps27aRibosomal protein S27a. (195 aa)
ENSORLP00000037597Tubulin domain-containing protein. (130 aa)
LOC101170318UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
ENSORLP00000036119Reverse transcriptase domain-containing protein. (1043 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (647 aa)
LOC101155224Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (514 aa)
vimVimentin like; Belongs to the intermediate filament family. (455 aa)
LOC101174042Dynein light chain. (89 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1502 aa)
LOC101162245Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
LOC105354455Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (783 aa)
H2MNV5_ORYLATubulin domain-containing protein. (103 aa)
LOC101168255Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
dync1i2Dynein, cytoplasmic 1, intermediate chain 2a. (643 aa)
LOC101166346Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (413 aa)
pofut2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (481 aa)
LOC101159587Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
LOC101155351Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
LOC101158306Dynein, cytoplasmic 1, intermediate chain 2b. (632 aa)
LOC111946865Pericentrin. (2839 aa)
LOC101157969Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (444 aa)
ubcUbiquitin B. (782 aa)
H2M970_ORYLAUbiquitin-like domain-containing protein. (129 aa)
ube2nUbiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
kxd1KxDL motif containing 1. (184 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC101164232Tubulin domain-containing protein. (100 aa)
arl13bADP-ribosylation factor-like 13b. (398 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (489 aa)
LOC101162462Dynein light chain. (89 aa)
park7DJ-1. (189 aa)
LOC101164165Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (496 aa)
H2LEF2_ORYLATubulin domain-containing protein. (136 aa)
LOC101171518Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC101171417Dynein light chain. (89 aa)
cetn3Centrin 3. (166 aa)
LOC101166777Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (466 aa)
tube1Tubulin, epsilon 1; Belongs to the tubulin family. (472 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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