STRINGSTRING
bach2 bach2 fbxl17 fbxl17 LOC101172454 LOC101172454 rps27a rps27a LOC101173402 LOC101173402 skp1 skp1 cul1 cul1 LOC101171022 LOC101171022 mafk mafk ubc ubc skp2 skp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bach2BTB and CNC homology 1, basic leucine zipper transcription factor 2b. (804 aa)
fbxl17F-box and leucine-rich repeat protein 17. (622 aa)
LOC101172454Uncharacterized protein. (705 aa)
rps27aRibosomal protein S27a. (195 aa)
LOC101173402BTB and CNC homology 1, basic leucine zipper transcription factor 1 a. (660 aa)
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
cul1Cullin 1b; Belongs to the cullin family. (801 aa)
LOC101171022BTB and CNC homology 1, basic leucine zipper transcription factor 1 b. (743 aa)
mafkV-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K. (175 aa)
ubcUbiquitin B. (782 aa)
skp2S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (421 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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