STRINGSTRING
slc1a4 slc1a4 LOC101170557 LOC101170557 LOC101159662 LOC101159662 SLC1A3 SLC1A3 LOC101160301 LOC101160301 LOC101167791 LOC101167791 LOC101174903 LOC101174903 LOC101170347 LOC101170347 slc1a5 slc1a5 LOC111949093 LOC111949093 slc1a1 slc1a1 slc1a2 slc1a2 LOC101172725 LOC101172725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slc1a4Amino acid transporter. (537 aa)
LOC101170557Amino acid transporter. (553 aa)
LOC101159662Amino acid transporter. (527 aa)
SLC1A3Amino acid transporter. (526 aa)
LOC101160301Amino acid transporter. (527 aa)
LOC101167791Amino acid transporter. (663 aa)
LOC101174903Amino acid transporter. (506 aa)
LOC101170347Solute carrier family 1 member 3a. (541 aa)
slc1a5Solute carrier family 1 member 5. (527 aa)
LOC111949093Amino acid transporter. (579 aa)
slc1a1Amino acid transporter. (489 aa)
slc1a2Amino acid transporter. (526 aa)
LOC101172725Amino acid transporter. (578 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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