STRINGSTRING
rfx1 rfx1 rfx5 rfx5 rfx3 rfx3 arid2 arid2 LOC101166798 LOC101166798 rfx4 rfx4 rfx6 rfx6 LOC101161970 LOC101161970 rfx2 rfx2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfx1Regulatory factor X, 1b (influences HLA class II expression). (832 aa)
rfx5Regulatory factor X, 5. (660 aa)
rfx3Regulatory factor X, 3 (influences HLA class II expression). (754 aa)
arid2AT rich interactive domain 2 (ARID, RFX-like). (1631 aa)
LOC101166798Regulatory factor X, 1a (influences HLA class II expression). (905 aa)
rfx4Regulatory factor X, 4. (733 aa)
rfx6Regulatory factor X, 6. (761 aa)
LOC101161970Regulatory factor X7b. (1461 aa)
rfx2Regulatory factor X, 2 (influences HLA class II expression). (751 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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