STRINGSTRING
LOC101155571-2 LOC101155571-2 MAFB MAFB actb actb LOC101155571 LOC101155571 gata-1 gata-1 foxm1 foxm1 ezh2 ezh2 abcb1 abcb1 klf5 klf5 myb myb slc40a1 slc40a1 bmp4 bmp4 LOC101168676 LOC101168676 snx5 snx5 hdhd2 hdhd2 sparc sparc shh shh ssbp2 ssbp2 LOC101168921 LOC101168921 LOC101172075 LOC101172075 cd34 cd34 lef1 lef1 H2LGV0_ORYLA H2LGV0_ORYLA suz12 suz12 LOC101162314 LOC101162314 spry4 spry4 gata2 gata2 hells hells LOC101166216 LOC101166216 LOC101155571-4 LOC101155571-4 prkch prkch lmo2 lmo2 LOC101174459 LOC101174459 LOC101155571-3 LOC101155571-3 SLCO3A1 SLCO3A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101155571-2Histone H2B 1/2. (124 aa)
MAFBMAF bZIP transcription factor B. (434 aa)
actbActin, cytoplasmic 1. (434 aa)
LOC101155571Histone H2B; Belongs to the histone H2B family. (124 aa)
gata-1Hematopietic transcription factor GATA-1. (417 aa)
foxm1Fork-head domain-containing protein. (674 aa)
ezh2Uncharacterized protein. (775 aa)
abcb1ATP-binding cassette, sub-family B (MDR/TAP), member 4. (1286 aa)
klf5Progesterone immunomodulatory binding factor 1. (498 aa)
mybUncharacterized protein. (592 aa)
slc40a1Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (562 aa)
bmp4Bone morphogenetic protein 4. (441 aa)
LOC101168676CD38 molecule. (264 aa)
snx5Sorting nexin 5. (375 aa)
hdhd2Haloacid dehalogenase-like hydrolase domain containing 2. (269 aa)
sparcOsteonectin. (298 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (414 aa)
ssbp2Si:ch211-130m23.3. (369 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
LOC101172075Solute carrier organic anion transporter family member. (703 aa)
cd34Uncharacterized protein. (328 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
H2LGV0_ORYLAANK_REP_REGION domain-containing protein. (740 aa)
suz12SUZ12 polycomb repressive complex 2 subunit b. (688 aa)
LOC101162314Inhibitor of DNA binding 4. (138 aa)
spry4Sprouty homolog 4 (Drosophila). (378 aa)
gata2Transcription factor GATA-2. (455 aa)
hellsHelicase, lymphoid specific. (853 aa)
LOC101166216Cyclin-dependent kinase inhibitor 1A. (156 aa)
LOC101155571-4Histone H2B 1/2. (124 aa)
prkchProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (686 aa)
lmo2LIM domain only 2 (rhombotin-like 1). (160 aa)
LOC101174459T-cell acute lymphocytic leukemia 1. (394 aa)
LOC101155571-3Histone H2B 1/2. (124 aa)
SLCO3A1Solute carrier organic anion transporter family member. (700 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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