22 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fgf19	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
	fgf4	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (188 aa)
	fgf3	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (245 aa)
	fbxw4	F-box and WD repeat domain containing 4. (389 aa)
	tlx1	T cell leukemia homeobox 1. (291 aa)
	tlx3	Homeobox domain-containing protein. (282 aa)
	fbxw11	F-box and WD repeat domain containing 11a. (562 aa)
	pax5	Paired box 5. (396 aa)
	npm3	Nucleophosmin/nucleoplasmin, 3. (159 aa)
	aup1	AUP1 lipid droplet regulating VLDL assembly factor. (417 aa)
	en2	Homeobox protein engrailed-like. (268 aa)
	FGF6	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (198 aa)
	fgf23	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family. (263 aa)
	loxl3	Lysyl oxidase-like 3b. (751 aa)
	en1	Homeobox protein engrailed-like. (280 aa)
	LOC101162992	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (223 aa)
	pax2	Paired box 2b. (387 aa)
	fgf18	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
	pax8	Paired box 8. (444 aa)
	fgf10	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (250 aa)
	fgf8	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
	FGF6-2	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FGF6	fgf18	ENSORLP00000019694	ENSORLP00000038417	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.436
FGF6	fgf19	ENSORLP00000019694	ENSORLP00000000352	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.535
FGF6	fgf23	ENSORLP00000019694	ENSORLP00000019815	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.	0.650
FGF6	fgf3	ENSORLP00000019694	ENSORLP00000000370	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.406
FGF6-2	fgf18	ENSORLP00000044445	ENSORLP00000038417	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.474
FGF6-2	fgf19	ENSORLP00000044445	ENSORLP00000000352	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.542
FGF6-2	fgf23	ENSORLP00000044445	ENSORLP00000019815	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.	0.650
FGF6-2	fgf3	ENSORLP00000044445	ENSORLP00000000370	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.431
LOC101162992	fgf18	ENSORLP00000030909	ENSORLP00000038417	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.531
LOC101162992	fgf19	ENSORLP00000030909	ENSORLP00000000352	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.548
LOC101162992	fgf23	ENSORLP00000030909	ENSORLP00000019815	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.	0.765
LOC101162992	fgf3	ENSORLP00000030909	ENSORLP00000000370	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.549
LOC101162992	fgf4	ENSORLP00000030909	ENSORLP00000000362	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.598
LOC101162992	fgf8	ENSORLP00000030909	ENSORLP00000042553	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.499
aup1	fbxw11	ENSORLP00000012059	ENSORLP00000005346	AUP1 lipid droplet regulating VLDL assembly factor.	F-box and WD repeat domain containing 11a.	0.426
aup1	fgf18	ENSORLP00000012059	ENSORLP00000038417	AUP1 lipid droplet regulating VLDL assembly factor.	Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.	0.504
aup1	loxl3	ENSORLP00000012059	ENSORLP00000022775	AUP1 lipid droplet regulating VLDL assembly factor.	Lysyl oxidase-like 3b.	0.662
aup1	npm3	ENSORLP00000012059	ENSORLP00000010662	AUP1 lipid droplet regulating VLDL assembly factor.	Nucleophosmin/nucleoplasmin, 3.	0.420
aup1	tlx3	ENSORLP00000012059	ENSORLP00000004939	AUP1 lipid droplet regulating VLDL assembly factor.	Homeobox domain-containing protein.	0.486
en1	fgf8	ENSORLP00000025789	ENSORLP00000042553	Homeobox protein engrailed-like.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.569