STRINGSTRING
cth cth LOC101171328 LOC101171328 LOC101166646 LOC101166646 LOC101169240 LOC101169240 LOC101171534 LOC101171534 got2 got2 l2hgdh l2hgdh LOC101168652 LOC101168652 LOC101168921 LOC101168921 mvd mvd srp54 srp54 LOC101157805-2 LOC101157805-2 tm7sf2 tm7sf2 ube2n ube2n wt1 wt1 LOC101166704 LOC101166704 ALDH18A1 ALDH18A1 LOC101157554 LOC101157554 maob maob LOC101167193 LOC101167193 LOC101155351 LOC101155351 LOC101159587 LOC101159587 pofut2 pofut2 LOC101166346 LOC101166346 LOC101168255 LOC101168255 rab10 rab10 LOC101172875 LOC101172875 irf8 irf8 LOC100049338 LOC100049338 LOC101172385 LOC101172385 HNMT HNMT LOC101174335 LOC101174335 LOC101158999 LOC101158999 LOC101167538 LOC101167538 LOC101161535 LOC101161535 ENSORLP00000043520 ENSORLP00000043520 ENSORLP00000043209 ENSORLP00000043209 LOC101168810 LOC101168810 h6pd h6pd LOC101158841 LOC101158841 LOC101160296 LOC101160296 wt1-2 wt1-2 LOC101170318 LOC101170318 gb-4 gb-4 LOC101175668 LOC101175668 LOC101155224 LOC101155224 hmgcs1 hmgcs1 actb actb steap2 steap2 gnmt gnmt ifrd1 ifrd1 hspbp1 hspbp1 GOT1 GOT1 LOC101166777 LOC101166777 LOC101171337 LOC101171337 LOC101171518 LOC101171518 cdo1 cdo1 mif mif hsd17b1 hsd17b1 gb-2 gb-2 LOC101158529 LOC101158529 HBE1 HBE1 LOC101159660 LOC101159660 coro1c coro1c LOC101170939 LOC101170939 eef1a eef1a rpn1 rpn1 got1 got1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cthCystathionase (cystathionine gamma-lyase), like. (416 aa)
LOC101171328Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (506 aa)
LOC101166646Coronin; Belongs to the WD repeat coronin family. (493 aa)
LOC101169240Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (734 aa)
LOC101171534Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (608 aa)
got2Aspartate aminotransferase. (428 aa)
l2hgdhL-2-hydroxyglutarate dehydrogenase. (443 aa)
LOC101168652Alpha-2-HS-glycoprotein 2. (397 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
mvdDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (396 aa)
srp54Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
LOC101157805-2AA_TRNA_LIGASE_II domain-containing protein. (698 aa)
tm7sf2Transmembrane 7 superfamily member 2. (431 aa)
ube2nUbiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
wt1Uncharacterized protein. (435 aa)
LOC101166704Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (452 aa)
ALDH18A1Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family. (782 aa)
LOC101157554Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
maobAmine oxidase. (568 aa)
LOC101167193Threonyl-tRNA synthetase-like 2. (812 aa)
LOC101155351Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
LOC101159587Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (416 aa)
pofut2Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (481 aa)
LOC101166346Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (413 aa)
LOC101168255Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
rab10RAB10, member RAS oncogene family. (201 aa)
LOC101172875Uncharacterized protein. (377 aa)
irf8Interferon regulatory factor 8. (421 aa)
LOC100049338Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (456 aa)
LOC101172385PKS_ER domain-containing protein. (378 aa)
HNMTHistamine N-methyltransferase. (233 aa)
LOC101174335Histamine N-methyltransferase. (294 aa)
LOC101158999Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (586 aa)
LOC101167538Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (457 aa)
LOC101161535Si:ch211-262h13.5. (533 aa)
ENSORLP00000043520Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (543 aa)
ENSORLP00000043209Alpha-1-microglobulin/bikunin precursor. (355 aa)
LOC101168810Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
h6pdHexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase). (810 aa)
LOC101158841Histamine N-methyltransferase. (332 aa)
LOC101160296Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
wt1-2Uncharacterized protein. (418 aa)
LOC101170318UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
gb-4GLOBIN domain-containing protein; Belongs to the globin family. (219 aa)
LOC101175668Amine oxidase. (538 aa)
LOC101155224Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (514 aa)
hmgcs13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (513 aa)
actbActin, cytoplasmic 1. (434 aa)
steap2STEAP family member 2, metalloreductase. (515 aa)
gnmtGlycine N-methyltransferase. (295 aa)
ifrd1Interferon-related developmental regulator 1. (428 aa)
hspbp1HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1. (336 aa)
GOT1Aspartate aminotransferase. (410 aa)
LOC101166777Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC101171337Threonyl-tRNA synthetase. (725 aa)
LOC101171518Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
cdo1Cysteine dioxygenase. (227 aa)
mifMacrophage migration inhibitory factor. (115 aa)
hsd17b1Hydroxysteroid (17-beta) dehydrogenase 1. (291 aa)
gb-2Embryonic beta-type globin; Belongs to the globin family. (147 aa)
LOC101158529Beta-type globin; Belongs to the globin family. (147 aa)
HBE1Hemoglobin subunit epsilon 1; Belongs to the globin family. (147 aa)
LOC101159660Urate oxidase. (357 aa)
coro1cCoronin; Belongs to the WD repeat coronin family. (1195 aa)
LOC101170939Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (461 aa)
rpn1Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (600 aa)
got1Aspartate aminotransferase. (449 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.