STRINGSTRING
LOC110015347 LOC110015347 LOC101160344 LOC101160344 mkrn1 mkrn1 tert tert gsk3b gsk3b ppard ppard raf1 raf1 mkrn2 mkrn2 rpl7 rpl7 LOC101168720 LOC101168720 tp53 tp53 pik3c3 pik3c3 pparg pparg
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC110015347Makorin, ring finger protein, 4. (381 aa)
LOC101160344Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (480 aa)
mkrn1Makorin, ring finger protein, 1. (464 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1090 aa)
gsk3bGlycogen synthase kinase 3 beta, genome duplicate a. (216 aa)
ppardUncharacterized protein. (517 aa)
raf1Raf-1 proto-oncogene, serine/threonine kinase a. (677 aa)
mkrn2Makorin, ring finger protein, 2. (438 aa)
rpl7Ribosomal protein L7. (245 aa)
LOC101168720Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. (352 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
ppargUncharacterized protein. (549 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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