STRINGSTRING
LOC101165402 LOC101165402 LOC101169907 LOC101169907 septin5 septin5 banf1 banf1 LOC101156778 LOC101156778 cdc73 cdc73 wdr13 wdr13 psmd12 psmd12 piwil1 piwil1 bcl2l13 bcl2l13 casp7 casp7 tdrd7 tdrd7 cdc20 cdc20 LOC101174454 LOC101174454 cdk2 cdk2 LOC101167730 LOC101167730 rplp0 rplp0 LOC101167262 LOC101167262 cdk1 cdk1 H2MXM9_ORYLA H2MXM9_ORYLA cdk5 cdk5 LOC101159061 LOC101159061 LOC101157209 LOC101157209 bcl2 bcl2 tgfb3 tgfb3 ilf3 ilf3 rpsa rpsa septin10 septin10 H2MMA0_ORYLA H2MMA0_ORYLA star star CDC42 CDC42 tufm tufm ilf2 ilf2 psmd7 psmd7 ccnh ccnh LOC101168433 LOC101168433 bub3 bub3 psmd2 psmd2 LOC101155815 LOC101155815 DYNLT3 DYNLT3 sars2 sars2 psmd6 psmd6 sox9 sox9 stau2 stau2 LOC101169222 LOC101169222 psmd1 psmd1 gart gart ipo5 ipo5 cyp19b cyp19b CDC37 CDC37 psmd5 psmd5 amh amh igf2bp3 igf2bp3 mif mif CKMT2 CKMT2 LOC101161165 LOC101161165 LOC101174651 LOC101174651 LOC101173310 LOC101173310 rpl6 rpl6 LOC101155037 LOC101155037 LOC101158002 LOC101158002 CKM CKM sars1 sars1 LOC101164721 LOC101164721 LOC101157631 LOC101157631 septin6 septin6 rps3 rps3 dld dld CKB CKB psmd13 psmd13 CASP6 CASP6 psmd3 psmd3 tdrd5 tdrd5 fadd fadd igf2bp1 igf2bp1 sdf2l1 sdf2l1 tradd tradd cdk7 cdk7 LOC101156378 LOC101156378 LOC101174707 LOC101174707 gapdh gapdh LOC101166239 LOC101166239 LOC101161140 LOC101161140 LOC101156069 LOC101156069 fen1 fen1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
LOC101165402Septin 8b; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (452 aa)
LOC101169907Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family. (408 aa)
septin5Septin 5a; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (462 aa)
banf1Barrier to autointegration factor 1. (90 aa)
LOC101156778FERM domain-containing protein. (572 aa)
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (529 aa)
wdr13WD repeat domain 13. (482 aa)
psmd12Proteasome 26S subunit, non-ATPase 12. (457 aa)
piwil1Uncharacterized protein; Belongs to the argonaute family. (1185 aa)
bcl2l13BCL2 like 13. (540 aa)
casp7Caspase 7, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (314 aa)
tdrd7Tudor domain containing 7 b. (1136 aa)
cdc20WD_REPEATS_REGION domain-containing protein. (501 aa)
LOC101174454Uncharacterized protein. (191 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
LOC101167262Uncharacterized protein; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
cdk1Cyclin-dependent kinase 1; Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C- terminus of RNA polymerase II. Catalytic component of MPF (By similarity); Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (303 aa)
H2MXM9_ORYLACaspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (209 aa)
cdk5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
LOC101159061Cathepsin E-like protease; Belongs to the peptidase A1 family. (412 aa)
LOC101157209Ubiquinol-cytochrome c reductase core protein 1. (478 aa)
bcl2BCL2 apoptosis regulator b. (202 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
ilf3Interleukin enhancer binding factor 3b. (841 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (301 aa)
septin10Septin 10; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (427 aa)
H2MMA0_ORYLATudor domain containing 9. (1043 aa)
starSteroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone. (285 aa)
CDC42Cell division cycle 42. (191 aa)
tufmElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (446 aa)
ilf2Interleukin enhancer binding factor 2. (387 aa)
psmd7Proteasome 26S subunit, non-ATPase 7. (324 aa)
ccnhCyclin H; Belongs to the cyclin family. (386 aa)
LOC101168433Uncharacterized protein. (370 aa)
bub3BUB3 mitotic checkpoint protein. (326 aa)
psmd226S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (906 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
DYNLT3Uncharacterized protein. (113 aa)
sars2Seryl-tRNA synthetase 2, mitochondrial. (521 aa)
psmd6Proteasome 26S subunit, non-ATPase 6. (389 aa)
sox9HMG box domain-containing protein. (476 aa)
stau2Staufen double-stranded RNA binding protein 2. (695 aa)
LOC101169222Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (334 aa)
psmd126S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (961 aa)
gartTrifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. (1007 aa)
ipo5Karyopherin (importin) beta 3. (1094 aa)
cyp19bAromatase B; Belongs to the cytochrome P450 family. (499 aa)
CDC37Cell division cycle 37 homolog (S. cerevisiae). (369 aa)
psmd5Proteasome 26S subunit, non-ATPase 5. (524 aa)
amhAnti-muellerian hormone. (496 aa)
igf2bp3Insulin-like growth factor 2 mRNA binding protein 3. (609 aa)
mifMacrophage migration inhibitory factor. (115 aa)
CKMT2Creatine kinase, mitochondrial 2; Belongs to the ATP:guanido phosphotransferase family. (414 aa)
LOC101161165Phosphoethanolamine methyltransferase. (492 aa)
LOC101174651Aromatase; Catalyzes the formation of aromatic C18 estrogens from C19 androgens. (518 aa)
LOC101173310Zgc:63587; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (348 aa)
rpl6Ribosomal protein L6. (260 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
LOC101158002Uncharacterized protein. (114 aa)
CKMUncharacterized protein; Belongs to the ATP:guanido phosphotransferase family. (421 aa)
sars1Seryl-tRNA synthetase. (516 aa)
LOC101164721Creatine kinase, mitochondrial 1A; Belongs to the ATP:guanido phosphotransferase family. (417 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
septin6Septin 6; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (427 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
dldDihydrolipoyl dehydrogenase. (507 aa)
CKBCreatine kinase B; Belongs to the ATP:guanido phosphotransferase family. (407 aa)
psmd13Proteasome 26S subunit, non-ATPase 13. (378 aa)
CASP6Caspase 6; Belongs to the peptidase C14A family. (292 aa)
psmd3Proteasome 26S subunit, non-ATPase 3. (516 aa)
tdrd5Uncharacterized protein. (932 aa)
faddUncharacterized protein. (192 aa)
igf2bp1Insulin-like growth factor 2 mRNA binding protein 1. (606 aa)
sdf2l1Stromal cell-derived factor 2-like 1. (219 aa)
traddTnfrsf1a-associated via death domain. (321 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (391 aa)
LOC101156378Uncharacterized protein; Belongs to the peptidase C14A family. (287 aa)
LOC101174707Proteasome 26S subunit, non-ATPase 11b. (422 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
LOC101166239Creatine kinase, muscle a; Belongs to the ATP:guanido phosphotransferase family. (381 aa)
LOC101161140Vitellogenin 3, phosvitinless. (1267 aa)
LOC101156069FERM domain-containing protein. (590 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (432 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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