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pdpk1 pdpk1 snap25 snap25 esr1 esr1 mylk mylk ppara ppara eno1 eno1 abl1 abl1 vdac1 vdac1 gapdh gapdh LOC101161140 LOC101161140 c-fos c-fos foxo3 foxo3 rb1 rb1 LOC100125446 LOC100125446 pnpo pnpo dcxr dcxr actn1 actn1 actb actb gpx8 gpx8 PPARA PPARA cdc20 cdc20 gpx3 gpx3 LOC101164997 LOC101164997 rnf4 rnf4 sirt4 sirt4 cyp3a cyp3a esr2-2 esr2-2 esr2 esr2 HDAC1 HDAC1 akt1 akt1 LOC101160075 LOC101160075 ghr-2 ghr-2 GPX4 GPX4 polr2f polr2f LOC101172913 LOC101172913 sod2 sod2 LOC101172340 LOC101172340 BAZ1A BAZ1A acad11 acad11 LOC100049233 LOC100049233 LOC101168921 LOC101168921 LOC101161096 LOC101161096 HDAC3 HDAC3 3bhsd 3bhsd sorbs2 sorbs2 lef1 lef1 LOC100302444 LOC100302444 gtf2b gtf2b pkn2 pkn2 mcm2 mcm2 polr2g polr2g nr3c1 nr3c1 znf143 znf143 ube2a ube2a gpx1 gpx1 aurkb aurkb DDX5 DDX5 gpx7 gpx7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdpk13-phosphoinositide dependent protein kinase 1b. (568 aa)
snap25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (634 aa)
mylkMyosin, light chain kinase a. (918 aa)
pparaUncharacterized protein. (480 aa)
eno1Enolase 1a, (alpha). (432 aa)
abl1Tyrosine-protein kinase. (1106 aa)
vdac1Voltage-dependent anion channel 1. (299 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
LOC101161140Vitellogenin 3, phosvitinless. (1267 aa)
c-fosBZIP domain-containing protein. (376 aa)
foxo3Forkhead box O5. (668 aa)
rb1Retinoblastoma 1. (916 aa)
LOC100125446Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (226 aa)
pnpoPyridoxamine 5'-phosphate oxidase. (276 aa)
dcxrDicarbonyl/L-xylulose reductase. (244 aa)
actn1Actinin, alpha 1. (918 aa)
actbActin, cytoplasmic 1. (434 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
PPARAPeroxisome proliferator-activated receptor alpha b. (469 aa)
cdc20WD_REPEATS_REGION domain-containing protein. (501 aa)
gpx3Glutathione peroxidase; Belongs to the glutathione peroxidase family. (173 aa)
LOC101164997Mitogen-activated protein kinase. (384 aa)
rnf4RING-type domain-containing protein. (194 aa)
sirt4NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. (311 aa)
cyp3aUncharacterized protein. (500 aa)
esr2-2Uncharacterized protein. (541 aa)
esr2Uncharacterized protein. (574 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
akt1Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (496 aa)
LOC101160075DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (624 aa)
ghr-2Uncharacterized protein. (541 aa)
GPX4Glutathione peroxidase; Belongs to the glutathione peroxidase family. (207 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC101172913Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (226 aa)
LOC101172340Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
BAZ1ABromodomain adjacent to zinc finger domain 1A. (1452 aa)
acad11Acyl-CoA dehydrogenase family, member 11. (768 aa)
LOC100049233Androgen receptor beta subtype. (744 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
LOC101161096Glutathione peroxidase; Belongs to the glutathione peroxidase family. (128 aa)
HDAC3Histone deacetylase 3; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (440 aa)
3bhsd3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family. (374 aa)
sorbs2Sorbin and SH3 domain containing 2a. (1415 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
LOC100302444Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (790 aa)
gtf2bGeneral transcription factor IIB. (311 aa)
pkn2Protein kinase N2. (975 aa)
mcm2DNA helicase; Belongs to the MCM family. (888 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (175 aa)
nr3c1Glucocorticoid receptor GR1a. (793 aa)
znf143Zinc finger protein 143b. (625 aa)
ube2aUbiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (184 aa)
aurkbProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (332 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (631 aa)
gpx7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (185 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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