15 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	casp3	Uncharacterized protein; Belongs to the peptidase C14A family. (290 aa)
	plek	Pleckstrin. (350 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	LOC100049265	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (265 aa)
	plek2	Pleckstrin 2. (354 aa)
	smad2	Mothers against decapentaplegic homolog. (473 aa)
	tgfbr3	Transforming growth factor, beta receptor III. (801 aa)
	LOC101159109	Mothers against decapentaplegic homolog. (467 aa)
	zyx	Uncharacterized protein. (625 aa)
	arrb2	Arrestin, beta 2a. (408 aa)
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	LOC101156916	Neuropilin; Belongs to the neuropilin family. (955 aa)
	LOC101156378	Uncharacterized protein; Belongs to the peptidase C14A family. (287 aa)
	casp9	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (438 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (938 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100049265	casp3	ENSORLP00000010098	ENSORLP00000010793	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.902
LOC100049265	casp9	ENSORLP00000010098	ENSORLP00000040536	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.970
LOC101156378	casp9	ENSORLP00000040113	ENSORLP00000040536	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.974
LOC101159109	smad2	ENSORLP00000019646	ENSORLP00000014831	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.543
LOC101164480	SRC	ENSORLP00000036233	ENSORLP00000008431	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101164480	nrp1	ENSORLP00000036233	ENSORLP00000042087	Tyrosine-protein kinase.	Neuropilin; Belongs to the neuropilin family.	0.432
LOC101164480	plek2	ENSORLP00000036233	ENSORLP00000012210	Tyrosine-protein kinase.	Pleckstrin 2.	0.459
SRC	LOC101164480	ENSORLP00000008431	ENSORLP00000036233	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
SRC	nrp1	ENSORLP00000008431	ENSORLP00000042087	Tyrosine-protein kinase.	Neuropilin; Belongs to the neuropilin family.	0.432
SRC	plek2	ENSORLP00000008431	ENSORLP00000012210	Tyrosine-protein kinase.	Pleckstrin 2.	0.461
casp3	LOC100049265	ENSORLP00000010793	ENSORLP00000010098	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.902
casp3	casp9	ENSORLP00000010793	ENSORLP00000040536	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.970
casp9	LOC100049265	ENSORLP00000040536	ENSORLP00000010098	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.970
casp9	LOC101156378	ENSORLP00000040536	ENSORLP00000040113	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.974
casp9	casp3	ENSORLP00000040536	ENSORLP00000010793	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.970
nrp1	LOC101164480	ENSORLP00000042087	ENSORLP00000036233	Neuropilin; Belongs to the neuropilin family.	Tyrosine-protein kinase.	0.432
nrp1	SRC	ENSORLP00000042087	ENSORLP00000008431	Neuropilin; Belongs to the neuropilin family.	Tyrosine-protein kinase.	0.432
plek2	LOC101164480	ENSORLP00000012210	ENSORLP00000036233	Pleckstrin 2.	Tyrosine-protein kinase.	0.459
plek2	SRC	ENSORLP00000012210	ENSORLP00000008431	Pleckstrin 2.	Tyrosine-protein kinase.	0.461
smad2	LOC101159109	ENSORLP00000014831	ENSORLP00000019646	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.543