16 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MTFP1	Mitochondrial fission process 1. (164 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (938 aa)
	LOC101170876	Uncharacterized protein; Belongs to the protein kinase superfamily. (354 aa)
	LOC101156378	Uncharacterized protein; Belongs to the peptidase C14A family. (287 aa)
	nck2	Cytoplasmic protein. (398 aa)
	LOC101156916	Neuropilin; Belongs to the neuropilin family. (955 aa)
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	LOC101163742	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (377 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	LOC101167272	Uncoupling protein 1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	LOC101160964	Uncharacterized protein; Belongs to the protein kinase superfamily. (359 aa)
	nck1	Cytoplasmic protein. (392 aa)
	casp3	Uncharacterized protein; Belongs to the peptidase C14A family. (290 aa)
	LOC101157368	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (291 aa)
	LOC100049265	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (265 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100049265	casp3	ENSORLP00000010098	ENSORLP00000010793	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.902
LOC101160964	LOC101163742	ENSORLP00000018527	ENSORLP00000033579	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC101160964	LOC101170876	ENSORLP00000018527	ENSORLP00000045423	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC101160964	prkacb	ENSORLP00000018527	ENSORLP00000026566	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.901
LOC101163742	LOC101160964	ENSORLP00000033579	ENSORLP00000018527	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC101163742	LOC101170876	ENSORLP00000033579	ENSORLP00000045423	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC101163742	prkacb	ENSORLP00000033579	ENSORLP00000026566	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.901
LOC101164480	SRC	ENSORLP00000036233	ENSORLP00000008431	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101164480	nck1	ENSORLP00000036233	ENSORLP00000012449	Tyrosine-protein kinase.	Cytoplasmic protein.	0.432
LOC101164480	nck2	ENSORLP00000036233	ENSORLP00000039494	Tyrosine-protein kinase.	Cytoplasmic protein.	0.432
LOC101164480	nrp1	ENSORLP00000036233	ENSORLP00000042087	Tyrosine-protein kinase.	Neuropilin; Belongs to the neuropilin family.	0.432
LOC101170876	LOC101160964	ENSORLP00000045423	ENSORLP00000018527	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
LOC101170876	LOC101163742	ENSORLP00000045423	ENSORLP00000033579	Uncharacterized protein; Belongs to the protein kinase superfamily.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.900
LOC101170876	prkacb	ENSORLP00000045423	ENSORLP00000026566	Uncharacterized protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.900
SRC	LOC101164480	ENSORLP00000008431	ENSORLP00000036233	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
SRC	nck1	ENSORLP00000008431	ENSORLP00000012449	Tyrosine-protein kinase.	Cytoplasmic protein.	0.432
SRC	nck2	ENSORLP00000008431	ENSORLP00000039494	Tyrosine-protein kinase.	Cytoplasmic protein.	0.432
SRC	nrp1	ENSORLP00000008431	ENSORLP00000042087	Tyrosine-protein kinase.	Neuropilin; Belongs to the neuropilin family.	0.432
casp3	LOC100049265	ENSORLP00000010793	ENSORLP00000010098	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	0.902
nck1	LOC101164480	ENSORLP00000012449	ENSORLP00000036233	Cytoplasmic protein.	Tyrosine-protein kinase.	0.432