21 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pbx1	Homeobox domain-containing protein. (428 aa)
	hivep1	Human immunodeficiency virus type I enhancer binding protein 1. (2533 aa)
	ar-alpha	Uncharacterized protein. (687 aa)
	AIF1	Allograft inflammatory factor 1. (154 aa)
	LOC101157565	Uncharacterized protein. (643 aa)
	LOC101161658	Allograft inflammatory factor 1-like. (148 aa)
	LOC101154761	Signal transducer and activator of transcription. (763 aa)
	hivep2	Human immunodeficiency virus type I enhancer binding protein 2a. (2352 aa)
	LOC101162694	Human immunodeficiency virus type I enhancer binding protein 3a. (1692 aa)
	bcl6	BCL6A transcription repressor a. (743 aa)
	LOC101158490	Signal transducer and activator of transcription. (746 aa)
	LOC101172525	Pre-B-cell leukemia homeobox 2. (396 aa)
	LOC101174797	Human immunodeficiency virus type I enhancer binding protein 3b. (1991 aa)
	LOC101159440	Pre-B-cell leukemia transcription factor 4. (381 aa)
	LOC101157992	Uncharacterized protein. (637 aa)
	msx1	Muscle segment homeobox 1a. (275 aa)
	LOC101160104	Pre-B-cell leukemia homeobox 1b. (428 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (301 aa)
	TLR5	Toll like receptor 5; Belongs to the Toll-like receptor family. (889 aa)
	il10	Interleukin 10. (181 aa)
	LOC100049233	Androgen receptor beta subtype. (744 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIF1	LOC101157565	ENSORLP00000008655	ENSORLP00000005736	Allograft inflammatory factor 1.	Uncharacterized protein.	0.441
AIF1	LOC101157992	ENSORLP00000008655	ENSORLP00000022071	Allograft inflammatory factor 1.	Uncharacterized protein.	0.648
AIF1	LOC101162694	ENSORLP00000008655	ENSORLP00000040828	Allograft inflammatory factor 1.	Human immunodeficiency virus type I enhancer binding protein 3a.	0.543
AIF1	LOC101174797	ENSORLP00000008655	ENSORLP00000033826	Allograft inflammatory factor 1.	Human immunodeficiency virus type I enhancer binding protein 3b.	0.543
AIF1	TLR5	ENSORLP00000008655	ENSORLP00000020303	Allograft inflammatory factor 1.	Toll like receptor 5; Belongs to the Toll-like receptor family.	0.574
AIF1	hivep1	ENSORLP00000008655	ENSORLP00000011624	Allograft inflammatory factor 1.	Human immunodeficiency virus type I enhancer binding protein 1.	0.543
AIF1	hivep2	ENSORLP00000008655	ENSORLP00000040727	Allograft inflammatory factor 1.	Human immunodeficiency virus type I enhancer binding protein 2a.	0.447
AIF1	il10	ENSORLP00000008655	ENSORLP00000019691	Allograft inflammatory factor 1.	Interleukin 10.	0.549
AIF1	rpsa	ENSORLP00000008655	ENSORLP00000020347	Allograft inflammatory factor 1.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.575
LOC100049233	ar-alpha	ENSORLP00000011941	ENSORLP00000010323	Androgen receptor beta subtype.	Uncharacterized protein.	0.908
LOC101154761	LOC101157565	ENSORLP00000000200	ENSORLP00000005736	Signal transducer and activator of transcription.	Uncharacterized protein.	0.430
LOC101154761	LOC101158490	ENSORLP00000000200	ENSORLP00000044383	Signal transducer and activator of transcription.	Signal transducer and activator of transcription.	0.904
LOC101154761	il10	ENSORLP00000000200	ENSORLP00000019691	Signal transducer and activator of transcription.	Interleukin 10.	0.574
LOC101157565	AIF1	ENSORLP00000005736	ENSORLP00000008655	Uncharacterized protein.	Allograft inflammatory factor 1.	0.441
LOC101157565	LOC101154761	ENSORLP00000005736	ENSORLP00000000200	Uncharacterized protein.	Signal transducer and activator of transcription.	0.430
LOC101157565	LOC101158490	ENSORLP00000005736	ENSORLP00000044383	Uncharacterized protein.	Signal transducer and activator of transcription.	0.418
LOC101157565	LOC101159440	ENSORLP00000005736	ENSORLP00000030537	Uncharacterized protein.	Pre-B-cell leukemia transcription factor 4.	0.518
LOC101157565	LOC101160104	ENSORLP00000005736	ENSORLP00000020891	Uncharacterized protein.	Pre-B-cell leukemia homeobox 1b.	0.514
LOC101157565	LOC101161658	ENSORLP00000005736	ENSORLP00000004676	Uncharacterized protein.	Allograft inflammatory factor 1-like.	0.441
LOC101157565	LOC101172525	ENSORLP00000005736	ENSORLP00000039311	Uncharacterized protein.	Pre-B-cell leukemia homeobox 2.	0.511