STRINGSTRING
pax2 pax2 gapdh gapdh wt1-2 wt1-2 LOC101163346 LOC101163346 pax1 pax1 pax3 pax3 LOC101158143 LOC101158143 pdx1 pdx1 dnajc24 dnajc24 bmp2 bmp2 depdc7 depdc7 pax6 pax6 LOC101162526 LOC101162526 wt1 wt1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pax2Paired box 2b. (387 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
wt1-2Uncharacterized protein. (418 aa)
LOC101163346Bone morphogenetic protein 16. (516 aa)
pax1Paired-box transcription factor pax1. (356 aa)
pax3Paired box 3b. (496 aa)
LOC101158143Paired box 10. (283 aa)
pdx1Pancreatic and duodenal homeobox 1. (262 aa)
dnajc24Uncharacterized protein. (166 aa)
bmp2TGF_BETA_2 domain-containing protein. (413 aa)
depdc7DEP domain containing 7, paralog a. (533 aa)
pax6Paired box protein Pax-6; May be a transcription factor with important functions in eye and nasal development; Belongs to the paired homeobox family. (457 aa)
LOC101162526DEP domain containing 7. (532 aa)
wt1Uncharacterized protein. (435 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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