STRINGSTRING
ENSORLP00000043059 ENSORLP00000043059 H3-3B H3-3B H2L503_ORYLA H2L503_ORYLA H2L5K1_ORYLA H2L5K1_ORYLA H2L5L2_ORYLA H2L5L2_ORYLA H2L6K8_ORYLA H2L6K8_ORYLA LOC101159638 LOC101159638 LOC101168145 LOC101168145 H2LD49_ORYLA H2LD49_ORYLA eef1a eef1a H3-2 H3-2 vsx2 vsx2 LOC101154771 LOC101154771 msi1 msi1 ENSORLP00000041905 ENSORLP00000041905 msi2 msi2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSORLP00000043059Histone H3; Belongs to the histone H3 family. (132 aa)
H3-3BHistone H3; Belongs to the histone H3 family. (140 aa)
H2L503_ORYLAHistone H3; Belongs to the histone H3 family. (100 aa)
H2L5K1_ORYLAHistone H3; Belongs to the histone H3 family. (136 aa)
H2L5L2_ORYLAHistone H3; Belongs to the histone H3 family. (125 aa)
H2L6K8_ORYLAHistone H3; Belongs to the histone H3 family. (107 aa)
LOC101159638Histone H3; Belongs to the histone H3 family. (136 aa)
LOC101168145Visual system homeobox 1 homolog, chx10-like. (367 aa)
H2LD49_ORYLAHistone H3; Belongs to the histone H3 family. (134 aa)
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (461 aa)
H3-2Histone H3; Belongs to the histone H3 family. (139 aa)
vsx2Visual system homeobox 2; Acts as a transcriptional regulator (By similarity). Mediates the differentiation of V2a interneurons (By similarity). Plays a role in eye development and organization of the neuroretina (By similarity). Belongs to the paired homeobox family. (393 aa)
LOC101154771Uncharacterized protein. (355 aa)
msi1Uncharacterized protein. (349 aa)
ENSORLP00000041905Histone H3; Belongs to the histone H3 family. (101 aa)
msi2Musashi RNA-binding protein 2a. (389 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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