14 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fst	Follistatin a. (321 aa)
	dlx5	Distal-less homeobox 5a. (296 aa)
	SMAD4	Mothers against decapentaplegic homolog. (510 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	bmp2	TGF_BETA_2 domain-containing protein. (413 aa)
	bmp5	Bone morphogenetic protein 5. (417 aa)
	runx2	Runt-related transcription factor. (461 aa)
	LOC100125511	Metalloendopeptidase. (970 aa)
	bmp4	Bone morphogenetic protein 4. (441 aa)
	entpd5	Ectonucleoside triphosphate diphosphohydrolase 5a; Belongs to the GDA1/CD39 NTPase family. (560 aa)
	coll	Collagenase. (470 aa)
	LOC100529176	Collagen, type X, alpha 1a. (643 aa)
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	smad7	Mothers against decapentaplegic homolog. (375 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100529176	coll	ENSORLP00000026494	ENSORLP00000025463	Collagen, type X, alpha 1a.	Collagenase.	0.508
LOC100529176	entpd5	ENSORLP00000026494	ENSORLP00000020393	Collagen, type X, alpha 1a.	Ectonucleoside triphosphate diphosphohydrolase 5a; Belongs to the GDA1/CD39 NTPase family.	0.522
LOC100529176	runx2	ENSORLP00000026494	ENSORLP00000012748	Collagen, type X, alpha 1a.	Runt-related transcription factor.	0.606
LOC101164480	SRC	ENSORLP00000036233	ENSORLP00000008431	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101164480	runx2	ENSORLP00000036233	ENSORLP00000012748	Tyrosine-protein kinase.	Runt-related transcription factor.	0.533
SMAD4	bmp2	ENSORLP00000006328	ENSORLP00000012259	Mothers against decapentaplegic homolog.	TGF_BETA_2 domain-containing protein.	0.760
SMAD4	bmp4	ENSORLP00000006328	ENSORLP00000016673	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 4.	0.761
SMAD4	bmp5	ENSORLP00000006328	ENSORLP00000012427	Mothers against decapentaplegic homolog.	Bone morphogenetic protein 5.	0.483
SMAD4	runx2	ENSORLP00000006328	ENSORLP00000012748	Mothers against decapentaplegic homolog.	Runt-related transcription factor.	0.602
SMAD4	smad7	ENSORLP00000006328	ENSORLP00000044215	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.772
SRC	LOC101164480	ENSORLP00000008431	ENSORLP00000036233	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
SRC	runx2	ENSORLP00000008431	ENSORLP00000012748	Tyrosine-protein kinase.	Runt-related transcription factor.	0.432
bmp2	SMAD4	ENSORLP00000012259	ENSORLP00000006328	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.760
bmp2	bmp4	ENSORLP00000012259	ENSORLP00000016673	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.910
bmp2	bmp5	ENSORLP00000012259	ENSORLP00000012427	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 5.	0.634
bmp2	dlx5	ENSORLP00000012259	ENSORLP00000005733	TGF_BETA_2 domain-containing protein.	Distal-less homeobox 5a.	0.551
bmp2	fst	ENSORLP00000012259	ENSORLP00000002355	TGF_BETA_2 domain-containing protein.	Follistatin a.	0.596
bmp2	runx2	ENSORLP00000012259	ENSORLP00000012748	TGF_BETA_2 domain-containing protein.	Runt-related transcription factor.	0.687
bmp2	smad7	ENSORLP00000012259	ENSORLP00000044215	TGF_BETA_2 domain-containing protein.	Mothers against decapentaplegic homolog.	0.555
bmp4	SMAD4	ENSORLP00000016673	ENSORLP00000006328	Bone morphogenetic protein 4.	Mothers against decapentaplegic homolog.	0.761