STRINGSTRING
ccdc103 ccdc103 ccdc65 ccdc65 ccdc40 ccdc40 dnah5 dnah5 rfx3 rfx3 serpine1 serpine1 myb myb rsph9 rsph9 cftr cftr zmynd10 zmynd10 dnaaf3 dnaaf3 cdc20b cdc20b ccno ccno LOC101159735 LOC101159735 dnai2 dnai2 ENSORLP00000036098 ENSORLP00000036098 rfx2 rfx2 foxj1 foxj1 lrrc6 lrrc6 armc4 armc4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccdc103Dynein_attach_N domain-containing protein. (242 aa)
ccdc65NYD-SP28 domain-containing protein. (454 aa)
ccdc40Coiled-coil domain containing 40. (950 aa)
dnah5Dynein, axonemal, heavy chain 5. (4159 aa)
rfx3Regulatory factor X, 3 (influences HLA class II expression). (754 aa)
serpine1SERPIN domain-containing protein; Belongs to the serpin family. (447 aa)
mybUncharacterized protein. (592 aa)
rsph9Radial spoke head 9 homolog. (272 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1502 aa)
zmynd10Zinc finger, MYND-type containing 10. (436 aa)
dnaaf3Dynein, axonemal, assembly factor 3 like. (450 aa)
cdc20bWD_REPEATS_REGION domain-containing protein. (475 aa)
ccnoUncharacterized protein; Belongs to the cyclin family. (400 aa)
LOC101159735Radial spoke head component 4A. (453 aa)
dnai2Dynein axonemal intermediate chain 2a. (578 aa)
ENSORLP00000036098Dynein assembly factor 1, axonemal. (317 aa)
rfx2Regulatory factor X, 2 (influences HLA class II expression). (751 aa)
foxj1Fork-head domain-containing protein. (474 aa)
lrrc6Leucine rich repeat containing 6. (504 aa)
armc4Armadillo repeat containing 4. (1017 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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