STRINGSTRING
gapdh gapdh pomc pomc actb actb LOC101167730 LOC101167730 fdxr fdxr LOC101172325 LOC101172325 LOC101168921 LOC101168921 cyp17a2 cyp17a2 3bhsd 3bhsd LOC101165632 LOC101165632 LOC101164777 LOC101164777
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
pomcProopiomelanocortin. (212 aa)
actbActin, cytoplasmic 1. (434 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
fdxrNADPH:adrenodoxin oxidoreductase, mitochondrial. (495 aa)
LOC101172325Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (522 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
cyp17a2Cytochrome P450 family 17 polypeptide 2; Belongs to the cytochrome P450 family. (521 aa)
3bhsd3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family. (374 aa)
LOC101165632Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (513 aa)
LOC101164777Uncharacterized protein. (265 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.