STRINGSTRING
LOC101174651 LOC101174651 gapdh gapdh LOC101167730 LOC101167730 dmy dmy foxl2 foxl2 figla figla sox9 sox9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101174651Aromatase; Catalyzes the formation of aromatic C18 estrogens from C19 androgens. (518 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
dmyDoublesex- and mab-3-related transcription factor 1; Transcription factor that acts both as a transcription. (283 aa)
foxl2Forkhead box L2. (306 aa)
figlaBHLH domain-containing protein. (200 aa)
sox9HMG box domain-containing protein. (476 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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