STRINGSTRING
ccnb1 ccnb1 LOC101170426 LOC101170426 LOC101170748 LOC101170748 pgk1 pgk1 cdk1 cdk1 piwil1 piwil1 ddx4 ddx4 gapdh gapdh eif5b eif5b LOC101161188 LOC101161188
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccnb1G2/mitotic-specific cyclin-B1; Essential for the control of the cell cycle at the G2/M (mitosis) transition; Belongs to the cyclin family. Cyclin AB subfamily. (404 aa)
LOC101170426Pyruvate kinase; Belongs to the pyruvate kinase family. (530 aa)
LOC101170748Pyruvate kinase; Belongs to the pyruvate kinase family. (550 aa)
pgk1Phosphoglycerate kinase. (421 aa)
cdk1Cyclin-dependent kinase 1; Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C- terminus of RNA polymerase II. Catalytic component of MPF (By similarity); Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. (303 aa)
piwil1Uncharacterized protein; Belongs to the argonaute family. (1185 aa)
ddx4Uncharacterized protein; Belongs to the DEAD box helicase family. (727 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
eif5bEukaryotic translation initiation factor 5B. (1195 aa)
LOC101161188Pyruvate kinase; Belongs to the pyruvate kinase family. (543 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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