STRINGSTRING
piwil1 piwil1 gapdh gapdh LOC101167730 LOC101167730 dnd1 dnd1 ddx4 ddx4 nanos3 nanos3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
piwil1Uncharacterized protein; Belongs to the argonaute family. (1185 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
dnd1Dead end protein. (372 aa)
ddx4Uncharacterized protein; Belongs to the DEAD box helicase family. (727 aa)
nanos3NANOS3; Belongs to the nanos family. (201 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.