STRINGSTRING
wt1 wt1 rec8 rec8 nanog nanog cpeb1 cpeb1 foxl2 foxl2 tgfb3 tgfb3 LOC101159109 LOC101159109 figla figla TCF4 TCF4 wt1-2 wt1-2 LOC101157631 LOC101157631 LOC101155037 LOC101155037 cyp26b1 cyp26b1 lhx8 lhx8 SMAD4 SMAD4 sox9 sox9 LOC100049265 LOC100049265 casp3 casp3 LOC101155815 LOC101155815 nanos2 nanos2 spo11 spo11 smad2 smad2 nanos3 nanos3 wnt4 wnt4 LOC101155880 LOC101155880 mei1 mei1 LOC101156378 LOC101156378
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wt1Uncharacterized protein. (435 aa)
rec8REC8 meiotic recombination protein b. (566 aa)
nanogHomeobox domain-containing protein. (420 aa)
cpeb1Cytoplasmic polyadenylation element binding protein 1b. (584 aa)
foxl2Forkhead box L2. (306 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC101159109Mothers against decapentaplegic homolog. (467 aa)
figlaBHLH domain-containing protein. (200 aa)
TCF4Transcription factor 4. (655 aa)
wt1-2Uncharacterized protein. (418 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
cyp26b1Cytochrome P450 26B1; Belongs to the cytochrome P450 family. (512 aa)
lhx8LIM homeobox 8b. (365 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
sox9HMG box domain-containing protein. (476 aa)
LOC100049265Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (265 aa)
casp3Uncharacterized protein; Belongs to the peptidase C14A family. (290 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
nanos2Nanos-type domain-containing protein; Belongs to the nanos family. (155 aa)
spo11SPO11 initiator of meiotic double stranded breaks. (399 aa)
smad2Mothers against decapentaplegic homolog. (473 aa)
nanos3NANOS3; Belongs to the nanos family. (201 aa)
wnt4Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (355 aa)
LOC101155880HORMA domain containing 1. (345 aa)
mei1Meiotic double-stranded break formation protein 1. (1324 aa)
LOC101156378Uncharacterized protein; Belongs to the peptidase C14A family. (287 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.