STRINGSTRING
LOC101159505 LOC101159505 ankrd1 ankrd1 rpl7 rpl7 LOC101170393 LOC101170393 LOC101167730 LOC101167730 LOC101165521 LOC101165521 ampd1 ampd1 LOC101161140 LOC101161140 gapdh gapdh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101159505Titin-cap (telethonin). (179 aa)
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (307 aa)
rpl7Ribosomal protein L7. (245 aa)
LOC101170393Myozenin 2b. (215 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
LOC101165521Myozenin 2a. (267 aa)
ampd1AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. (783 aa)
LOC101161140Vitellogenin 3, phosvitinless. (1267 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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