STRINGSTRING
vdralpha vdralpha LOC100302444 LOC100302444 SRC SRC nr1h4 nr1h4 LOC101164480 LOC101164480 vdr vdr nr3c2 nr3c2 nr3c1 nr3c1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vdralphaUncharacterized protein. (421 aa)
LOC100302444Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (790 aa)
SRCTyrosine-protein kinase. (544 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (485 aa)
LOC101164480Tyrosine-protein kinase. (551 aa)
vdrVitamin D receptor beta. (425 aa)
nr3c2Mineralocorticoid receptor. (994 aa)
nr3c1Glucocorticoid receptor GR1a. (793 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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