STRINGSTRING
bmp2 bmp2 tgfb3 tgfb3 LOC101155037 LOC101155037 SMAD4 SMAD4 LOC101155815 LOC101155815 gata2 gata2 LOC101157631 LOC101157631 gsc gsc chrd chrd
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bmp2TGF_BETA_2 domain-containing protein. (413 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
gata2Transcription factor GATA-2. (455 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
gscGoosecoid. (238 aa)
chrdChordin; Belongs to the chordin family. (946 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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