19 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2L4B7_ORYLA	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family. (737 aa)
	Mtor	Serine/threonine-protein kinase TOR. (1023 aa)
	pax7	Uncharacterized protein. (524 aa)
	LOC101168921	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
	LOC101163655	Protein regulator of cytokinesis 1a. (586 aa)
	actb	Actin, cytoplasmic 1. (434 aa)
	gpi	Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
	degs2	Delta(4)-desaturase, sphingolipid 2. (322 aa)
	LOC101170311	Uncharacterized protein. (723 aa)
	LOC101170061	Uncharacterized protein. (866 aa)
	MAMDC2	MAM domain containing 2. (690 aa)
	bmp4	Bone morphogenetic protein 4. (441 aa)
	tsn	Translin. (227 aa)
	eif4ebp1	Uncharacterized protein. (137 aa)
	LOC101174729	Aryl hydrocarbon receptor 2. (904 aa)
	ahr	Uncharacterized protein. (879 aa)
	LOC101173933	Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
	LOC101159882	Uncharacterized protein. (623 aa)
	LOC101165490	Eukaryotic translation initiation factor 4E binding protein 1. (120 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2L4B7_ORYLA	LOC101165490	ENSORLP00000000606	ENSORLP00000034658	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Eukaryotic translation initiation factor 4E binding protein 1.	0.575
H2L4B7_ORYLA	Mtor	ENSORLP00000000606	ENSORLP00000000608	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Serine/threonine-protein kinase TOR.	0.968
H2L4B7_ORYLA	eif4ebp1	ENSORLP00000000606	ENSORLP00000008157	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.575
LOC101159882	MAMDC2	ENSORLP00000041843	ENSORLP00000016940	Uncharacterized protein.	MAM domain containing 2.	0.813
LOC101159882	degs2	ENSORLP00000041843	ENSORLP00000027337	Uncharacterized protein.	Delta(4)-desaturase, sphingolipid 2.	0.656
LOC101159882	tsn	ENSORLP00000041843	ENSORLP00000012605	Uncharacterized protein.	Translin.	0.821
LOC101163655	MAMDC2	ENSORLP00000007109	ENSORLP00000016940	Protein regulator of cytokinesis 1a.	MAM domain containing 2.	0.588
LOC101163655	degs2	ENSORLP00000007109	ENSORLP00000027337	Protein regulator of cytokinesis 1a.	Delta(4)-desaturase, sphingolipid 2.	0.511
LOC101163655	tsn	ENSORLP00000007109	ENSORLP00000012605	Protein regulator of cytokinesis 1a.	Translin.	0.603
LOC101165490	H2L4B7_ORYLA	ENSORLP00000034658	ENSORLP00000000606	Eukaryotic translation initiation factor 4E binding protein 1.	Mechanistic target of rapamycin kinase; Belongs to the PI3/PI4-kinase family.	0.575
LOC101165490	Mtor	ENSORLP00000034658	ENSORLP00000000608	Eukaryotic translation initiation factor 4E binding protein 1.	Serine/threonine-protein kinase TOR.	0.955
LOC101165490	eif4ebp1	ENSORLP00000034658	ENSORLP00000008157	Eukaryotic translation initiation factor 4E binding protein 1.	Uncharacterized protein.	0.903
LOC101170061	LOC101170311	ENSORLP00000022790	ENSORLP00000022794	Uncharacterized protein.	Uncharacterized protein.	0.565
LOC101170061	LOC101174729	ENSORLP00000022790	ENSORLP00000000166	Uncharacterized protein.	Aryl hydrocarbon receptor 2.	0.569
LOC101170061	ahr	ENSORLP00000022790	ENSORLP00000000168	Uncharacterized protein.	Uncharacterized protein.	0.575
LOC101170311	LOC101170061	ENSORLP00000022794	ENSORLP00000022790	Uncharacterized protein.	Uncharacterized protein.	0.565
LOC101170311	LOC101174729	ENSORLP00000022794	ENSORLP00000000166	Uncharacterized protein.	Aryl hydrocarbon receptor 2.	0.565
LOC101170311	ahr	ENSORLP00000022794	ENSORLP00000000168	Uncharacterized protein.	Uncharacterized protein.	0.551
LOC101173933	gpi	ENSORLP00000000310	ENSORLP00000027943	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.900
LOC101174729	LOC101170061	ENSORLP00000000166	ENSORLP00000022790	Aryl hydrocarbon receptor 2.	Uncharacterized protein.	0.569