15 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	arhgap18	Rho GTPase activating protein 18. (683 aa)
	lats1	Large tumor suppressor kinase 1. (1063 aa)
	erbb4	Receptor protein-tyrosine kinase. (1375 aa)
	foxo1	Fork-head domain-containing protein. (655 aa)
	LOC101173301	Uncharacterized protein. (2544 aa)
	Stab2	Uncharacterized protein. (323 aa)
	LOC101164480	Tyrosine-protein kinase. (551 aa)
	LOC101173202	RUNX family transcription factor 1. (574 aa)
	kras	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation. (189 aa)
	lyve1	Link domain-containing protein. (266 aa)
	flnc	Uncharacterized protein. (2745 aa)
	CDC42	Cell division cycle 42. (191 aa)
	SRC	Tyrosine-protein kinase. (544 aa)
	ect2	Epithelial cell transforming 2. (1098 aa)
	klf5	Progesterone immunomodulatory binding factor 1. (498 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	LOC101164480	ENSORLP00000015084	ENSORLP00000036233	Cell division cycle 42.	Tyrosine-protein kinase.	0.617
CDC42	LOC101173301	ENSORLP00000015084	ENSORLP00000037000	Cell division cycle 42.	Uncharacterized protein.	0.504
CDC42	SRC	ENSORLP00000015084	ENSORLP00000008431	Cell division cycle 42.	Tyrosine-protein kinase.	0.618
CDC42	ect2	ENSORLP00000015084	ENSORLP00000029882	Cell division cycle 42.	Epithelial cell transforming 2.	0.706
CDC42	erbb4	ENSORLP00000015084	ENSORLP00000020056	Cell division cycle 42.	Receptor protein-tyrosine kinase.	0.442
LOC101164480	CDC42	ENSORLP00000036233	ENSORLP00000015084	Tyrosine-protein kinase.	Cell division cycle 42.	0.617
LOC101164480	LOC101173202	ENSORLP00000036233	ENSORLP00000034738	Tyrosine-protein kinase.	RUNX family transcription factor 1.	0.432
LOC101164480	SRC	ENSORLP00000036233	ENSORLP00000008431	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC101164480	erbb4	ENSORLP00000036233	ENSORLP00000020056	Tyrosine-protein kinase.	Receptor protein-tyrosine kinase.	0.420
LOC101164480	kras	ENSORLP00000036233	ENSORLP00000031976	Tyrosine-protein kinase.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.530
LOC101173202	LOC101164480	ENSORLP00000034738	ENSORLP00000036233	RUNX family transcription factor 1.	Tyrosine-protein kinase.	0.432
LOC101173202	SRC	ENSORLP00000034738	ENSORLP00000008431	RUNX family transcription factor 1.	Tyrosine-protein kinase.	0.432
LOC101173301	CDC42	ENSORLP00000037000	ENSORLP00000015084	Uncharacterized protein.	Cell division cycle 42.	0.504
LOC101173301	flnc	ENSORLP00000037000	ENSORLP00000030479	Uncharacterized protein.	Uncharacterized protein.	0.902
SRC	CDC42	ENSORLP00000008431	ENSORLP00000015084	Tyrosine-protein kinase.	Cell division cycle 42.	0.618
SRC	LOC101164480	ENSORLP00000008431	ENSORLP00000036233	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
SRC	LOC101173202	ENSORLP00000008431	ENSORLP00000034738	Tyrosine-protein kinase.	RUNX family transcription factor 1.	0.432
SRC	erbb4	ENSORLP00000008431	ENSORLP00000020056	Tyrosine-protein kinase.	Receptor protein-tyrosine kinase.	0.420
SRC	kras	ENSORLP00000008431	ENSORLP00000031976	Tyrosine-protein kinase.	GTPase KRas; Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays an important role in the regulation of cell proliferation.	0.459
Stab2	lyve1	ENSORLP00000036902	ENSORLP00000030552	Uncharacterized protein.	Link domain-containing protein.	0.704