STRINGSTRING
myc myc LOC101155571-2 LOC101155571-2 actb actb LOC101155571 LOC101155571 pxdn pxdn sox2 sox2 TCF4 TCF4 Sox2 Sox2 klf4 klf4 LOC101168921 LOC101168921 LOC101155571-4 LOC101155571-4 LOC101155571-3 LOC101155571-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mycBHLH domain-containing protein. (527 aa)
LOC101155571-2Histone H2B 1/2. (124 aa)
actbActin, cytoplasmic 1. (434 aa)
LOC101155571Histone H2B; Belongs to the histone H2B family. (124 aa)
pxdnPeroxidasin. (1481 aa)
sox2SOX3 protein. (300 aa)
TCF4Transcription factor 4. (655 aa)
Sox2SRY-box transcription factor 2. (243 aa)
klf4Kruppel-like factor 4. (425 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
LOC101155571-4Histone H2B 1/2. (124 aa)
LOC101155571-3Histone H2B 1/2. (124 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: medium (44%) [HD]