26 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wnt10b	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (429 aa)
	dlx1	Distal-less homeobox 1a. (253 aa)
	eos2	IKAROS family zinc finger 4. (569 aa)
	mettl22	Methyltransferase like 22. (379 aa)
	wnt1	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (398 aa)
	lmbr1l	Limb development membrane protein 1-like; Belongs to the LIMR family. (492 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (114 aa)
	ikzf4	Uncharacterized protein. (549 aa)
	nup214	Nup214_FG domain-containing protein. (1974 aa)
	proc	Protein C (inactivator of coagulation factors Va and VIIIa), a. (436 aa)
	dusp28	Dual specificity phosphatase 28. (146 aa)
	WDR33	WD repeat domain 33. (1058 aa)
	sft2d3	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (222 aa)
	LOC101173972	Si:ch1073-184j22.1. (300 aa)
	ednra	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (439 aa)
	dnajc22	DnaJ (Hsp40) homolog, subfamily C, member 22. (339 aa)
	slc9a8	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (655 aa)
	en2	Homeobox protein engrailed-like. (268 aa)
	itgav	Integrin, alpha V; Belongs to the integrin alpha chain family. (971 aa)
	LOC101174545	Si:dkey-69o16.5. (240 aa)
	LOC100049397	Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 1 family. (60 aa)
	LOC101172973	Keratin 4; Belongs to the intermediate filament family. (470 aa)
	dlx2	Homeobox domain-containing protein. (277 aa)
	itga6	Integrin subunit alpha 6; Belongs to the integrin alpha chain family. (1078 aa)
	zc3h15	Zinc finger CCCH-type containing 15. (424 aa)
	en1	Homeobox protein engrailed-like. (280 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100049397	nup214	ENSORLP00000019508	ENSORLP00000008281	Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 1 family.	Nup214_FG domain-containing protein.	0.499
LOC101173972	LOC101174545	ENSORLP00000009017	ENSORLP00000017723	Si:ch1073-184j22.1.	Si:dkey-69o16.5.	0.661
LOC101173972	WDR33	ENSORLP00000009017	ENSORLP00000008960	Si:ch1073-184j22.1.	WD repeat domain 33.	0.568
LOC101173972	dlx1	ENSORLP00000009017	ENSORLP00000039727	Si:ch1073-184j22.1.	Distal-less homeobox 1a.	0.439
LOC101173972	dnajc22	ENSORLP00000009017	ENSORLP00000009560	Si:ch1073-184j22.1.	DnaJ (Hsp40) homolog, subfamily C, member 22.	0.499
LOC101173972	dusp28	ENSORLP00000009017	ENSORLP00000008464	Si:ch1073-184j22.1.	Dual specificity phosphatase 28.	0.678
LOC101173972	ednra	ENSORLP00000009017	ENSORLP00000009301	Si:ch1073-184j22.1.	Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family.	0.438
LOC101173972	eos2	ENSORLP00000009017	ENSORLP00000038517	Si:ch1073-184j22.1.	IKAROS family zinc finger 4.	0.565
LOC101173972	ikzf4	ENSORLP00000009017	ENSORLP00000001925	Si:ch1073-184j22.1.	Uncharacterized protein.	0.518
LOC101173972	itgav	ENSORLP00000009017	ENSORLP00000017712	Si:ch1073-184j22.1.	Integrin, alpha V; Belongs to the integrin alpha chain family.	0.435
LOC101173972	lmbr1l	ENSORLP00000009017	ENSORLP00000031255	Si:ch1073-184j22.1.	Limb development membrane protein 1-like; Belongs to the LIMR family.	0.522
LOC101173972	mettl22	ENSORLP00000009017	ENSORLP00000038502	Si:ch1073-184j22.1.	Methyltransferase like 22.	0.538
LOC101173972	proc	ENSORLP00000009017	ENSORLP00000008456	Si:ch1073-184j22.1.	Protein C (inactivator of coagulation factors Va and VIIIa), a.	0.575
LOC101173972	rps26	ENSORLP00000009017	ENSORLP00000001910	Si:ch1073-184j22.1.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.459
LOC101173972	sft2d3	ENSORLP00000009017	ENSORLP00000008973	Si:ch1073-184j22.1.	Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family.	0.620
LOC101173972	slc9a8	ENSORLP00000009017	ENSORLP00000011959	Si:ch1073-184j22.1.	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.	0.508
LOC101173972	zc3h15	ENSORLP00000009017	ENSORLP00000023256	Si:ch1073-184j22.1.	Zinc finger CCCH-type containing 15.	0.622
LOC101174545	LOC101173972	ENSORLP00000017723	ENSORLP00000009017	Si:dkey-69o16.5.	Si:ch1073-184j22.1.	0.661
LOC101174545	WDR33	ENSORLP00000017723	ENSORLP00000008960	Si:dkey-69o16.5.	WD repeat domain 33.	0.621
LOC101174545	dlx1	ENSORLP00000017723	ENSORLP00000039727	Si:dkey-69o16.5.	Distal-less homeobox 1a.	0.439