STRINGSTRING
rbp4 rbp4 LOC101168921 LOC101168921 LOC100049233 LOC100049233 LOC101174135 LOC101174135 LOC101167610 LOC101167610 TSC2 TSC2 LOC101158704 LOC101158704 cyp1a cyp1a LOC101169721 LOC101169721 LOC101170061 LOC101170061 LOC101170311 LOC101170311 lrp1b lrp1b LOC101168764 LOC101168764 dmy dmy LOC101167730 LOC101167730 actb actb LOC101166254 LOC101166254 Tsc2 Tsc2 LOC101161189 LOC101161189 esr1 esr1 gapdh gapdh rsad2 rsad2 LOC101161140 LOC101161140 LOC101161439 LOC101161439 LOC101174729 LOC101174729 ahr ahr rps18 rps18 LOC101163430 LOC101163430 hdlbp hdlbp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbp4Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family. (206 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
LOC100049233Androgen receptor beta subtype. (744 aa)
LOC101174135Uncharacterized protein. (989 aa)
LOC101167610Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor. (975 aa)
TSC2TSC complex subunit 2. (1608 aa)
LOC101158704Cytochrome P450, family 1, subfamily D, polypeptide 1; Belongs to the cytochrome P450 family. (543 aa)
cyp1aCytochrome P450 1A1; Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. (521 aa)
LOC101169721Apolipoprotein A-Ib. (323 aa)
LOC101170061Uncharacterized protein. (866 aa)
LOC101170311Uncharacterized protein. (723 aa)
lrp1bLow density lipoprotein receptor-related protein 1Bb. (4445 aa)
LOC101168764Tyrosine-protein kinase receptor. (1375 aa)
dmyDoublesex- and mab-3-related transcription factor 1; Transcription factor that acts both as a transcription. (283 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
actbActin, cytoplasmic 1. (434 aa)
LOC101166254Tyrosine-protein kinase receptor. (1387 aa)
Tsc2DUF3384 domain-containing protein. (164 aa)
LOC101161189Uncharacterized protein. (274 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (634 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
rsad2Radical S-adenosyl methionine domain containing 2. (352 aa)
LOC101161140Vitellogenin 3, phosvitinless. (1267 aa)
LOC101161439Uncharacterized protein. (272 aa)
LOC101174729Aryl hydrocarbon receptor 2. (904 aa)
ahrUncharacterized protein. (879 aa)
rps18Ribosomal protein S18. (214 aa)
LOC101163430Interferon regulatory factor. (293 aa)
hdlbpHigh density lipoprotein binding protein a. (1283 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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