22 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tryp	Trypsinogen; Belongs to the peptidase S1 family. (242 aa)
	LOC101158476	Cbl proto-oncogene C, E3 ubiquitin protein ligase. (557 aa)
	ngb	Neuroglobin; Belongs to the globin family. (185 aa)
	LOC101167667	Cryptochrome circadian regulator 1a. (624 aa)
	nqo1	Flavodoxin_2 domain-containing protein. (270 aa)
	LOC101166279	Rhomboid 5 homolog 1b (Drosophila). (901 aa)
	LOC101175375	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (721 aa)
	mb	Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. (147 aa)
	sod3	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (211 aa)
	LOC111946266	NAD(P)H dehydrogenase, quinone 1. (230 aa)
	ackr3	Chemokine (C-X-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (381 aa)
	LOC101172860	X globin; Belongs to the globin family. (198 aa)
	LOC101159817	Period circadian clock 3. (1264 aa)
	LOC101173389	Cryptochrome circadian regulator 2. (667 aa)
	LOC101163758	Uncharacterized protein. (852 aa)
	LOC100049331	Zona pellucida protein AX 1. (916 aa)
	ogg1	8-oxoguanine DNA glycosylase. (395 aa)
	cbl	Cbl proto-oncogene, E3 ubiquitin protein ligase. (946 aa)
	kank2	KN motif and ankyrin repeat domains 2. (1001 aa)
	nprl3	NPR3-like, GATOR1 complex subunit. (491 aa)
	lcmt1	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family. (334 aa)
	aqp8	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (258 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100049331	ogg1	ENSORLP00000015615	ENSORLP00000013488	Zona pellucida protein AX 1.	8-oxoguanine DNA glycosylase.	0.471
LOC101158476	tryp	ENSORLP00000044381	ENSORLP00000017065	Cbl proto-oncogene C, E3 ubiquitin protein ligase.	Trypsinogen; Belongs to the peptidase S1 family.	0.402
LOC101159817	LOC101167667	ENSORLP00000019968	ENSORLP00000039283	Period circadian clock 3.	Cryptochrome circadian regulator 1a.	0.824
LOC101159817	LOC101173389	ENSORLP00000019968	ENSORLP00000018430	Period circadian clock 3.	Cryptochrome circadian regulator 2.	0.828
LOC101163758	cbl	ENSORLP00000018205	ENSORLP00000009540	Uncharacterized protein.	Cbl proto-oncogene, E3 ubiquitin protein ligase.	0.901
LOC101163758	tryp	ENSORLP00000018205	ENSORLP00000017065	Uncharacterized protein.	Trypsinogen; Belongs to the peptidase S1 family.	0.402
LOC101166279	LOC101172860	ENSORLP00000031179	ENSORLP00000021338	Rhomboid 5 homolog 1b (Drosophila).	X globin; Belongs to the globin family.	0.530
LOC101166279	aqp8	ENSORLP00000031179	ENSORLP00000003812	Rhomboid 5 homolog 1b (Drosophila).	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.622
LOC101166279	kank2	ENSORLP00000031179	ENSORLP00000006721	Rhomboid 5 homolog 1b (Drosophila).	KN motif and ankyrin repeat domains 2.	0.811
LOC101166279	lcmt1	ENSORLP00000031179	ENSORLP00000003832	Rhomboid 5 homolog 1b (Drosophila).	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.	0.799
LOC101166279	mb	ENSORLP00000031179	ENSORLP00000028527	Rhomboid 5 homolog 1b (Drosophila).	Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.	0.535
LOC101166279	ngb	ENSORLP00000031179	ENSORLP00000042031	Rhomboid 5 homolog 1b (Drosophila).	Neuroglobin; Belongs to the globin family.	0.688
LOC101166279	nprl3	ENSORLP00000031179	ENSORLP00000006539	Rhomboid 5 homolog 1b (Drosophila).	NPR3-like, GATOR1 complex subunit.	0.741
LOC101167667	LOC101159817	ENSORLP00000039283	ENSORLP00000019968	Cryptochrome circadian regulator 1a.	Period circadian clock 3.	0.824
LOC101172860	LOC101166279	ENSORLP00000021338	ENSORLP00000031179	X globin; Belongs to the globin family.	Rhomboid 5 homolog 1b (Drosophila).	0.530
LOC101172860	aqp8	ENSORLP00000021338	ENSORLP00000003812	X globin; Belongs to the globin family.	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.494
LOC101172860	kank2	ENSORLP00000021338	ENSORLP00000006721	X globin; Belongs to the globin family.	KN motif and ankyrin repeat domains 2.	0.452
LOC101172860	lcmt1	ENSORLP00000021338	ENSORLP00000003832	X globin; Belongs to the globin family.	Leucine carboxyl methyltransferase 1; Methylates the carboxyl group of the C-terminal leucine residue of protein phosphatase 2A catalytic subunits to form alpha- leucine ester residues; Belongs to the methyltransferase superfamily. LCMT family.	0.584
LOC101172860	mb	ENSORLP00000021338	ENSORLP00000028527	X globin; Belongs to the globin family.	Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.	0.886
LOC101172860	nprl3	ENSORLP00000021338	ENSORLP00000006539	X globin; Belongs to the globin family.	NPR3-like, GATOR1 complex subunit.	0.456