STRINGSTRING
pcsk9 pcsk9 hspb7 hspb7 neo1 neo1 col1a2 col1a2 kcnip1 kcnip1 LOC101162492 LOC101162492 LOC101155555 LOC101155555 egf egf pbx3 pbx3 egfl7 egfl7 LOC101159440 LOC101159440 flnc flnc hand2 hand2 nfatc1 nfatc1 LOC101166705 LOC101166705 kcnj8 kcnj8 LOC101172781 LOC101172781 prrx1 prrx1 H2MD80_ORYLA H2MD80_ORYLA LOC101160614 LOC101160614 PLXND1 PLXND1 LOC101161493 LOC101161493 kif20a kif20a tp53 tp53 LOC101161247 LOC101161247 lmcd1 lmcd1 H2LAE2_ORYLA H2LAE2_ORYLA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pcsk9Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family. (642 aa)
hspb7SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (207 aa)
neo1Neogenin 1b. (1455 aa)
col1a2Collagen, type I, alpha 2. (1356 aa)
kcnip1Uncharacterized protein. (225 aa)
LOC101162492Synaptotagmin X. (551 aa)
LOC101155555Tensin 1b. (1736 aa)
egfEpidermal growth factor. (966 aa)
pbx3Homeobox domain-containing protein. (486 aa)
egfl7EGF-like-domain, multiple 7. (301 aa)
LOC101159440Pre-B-cell leukemia transcription factor 4. (381 aa)
flncUncharacterized protein. (2745 aa)
hand2Heart and neural crest derivatives expressed 2. (232 aa)
nfatc1RHD domain-containing protein. (898 aa)
LOC101166705Uncharacterized protein. (2523 aa)
kcnj8Potassium inwardly-rectifying channel, subfamily J, member 8. (417 aa)
LOC101172781ATP-binding cassette, sub-family C (CFTR/MRP), member 9. (1512 aa)
prrx1Paired related homeobox 1a. (246 aa)
H2MD80_ORYLAHyperpolarization activated cyclic nucleotide-gated potassium channel 4. (1429 aa)
LOC101160614Regulator of G protein signaling 6. (424 aa)
PLXND1Plexin D1. (1918 aa)
LOC101161493Nuclear factor of activated T cells 1. (858 aa)
kif20aKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (904 aa)
tp53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. (352 aa)
LOC101161247SET and MYND domain containing 1b. (489 aa)
lmcd1Uncharacterized protein. (380 aa)
H2LAE2_ORYLATensin 1. (981 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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