STRINGSTRING
frs2 frs2 LOC101158476 LOC101158476 stub1 stub1 fgf8 fgf8 hdac6 hdac6 NTN1 NTN1 gab1 gab1 crbn crbn LOC101166404 LOC101166404 fgf18 fgf18 LOC101160359 LOC101160359 ccdc141 ccdc141 sema3a sema3a wnt1 wnt1 plxna3 plxna3 prok2 prok2 robo1 robo1 anos1 anos1 sox10 sox10 egf egf flrt3 flrt3 LOC100049444 LOC100049444 ENSORLP00000032832 ENSORLP00000032832 Nedd4 Nedd4 rnf216 rnf216 polr3a polr3a tac3 tac3 LOC101168414 LOC101168414 plcg1 plcg1 plxnc1 plxnc1 emx2 emx2 neurod1 neurod1 pax3 pax3 LOC101155983 LOC101155983 dcc dcc dcx dcx fshb fshb lrit3 lrit3 neurog1 neurog1 LOC101169677 LOC101169677 dusp6 dusp6 fgfr1op fgfr1op sp9 sp9 il17rd il17rd lhx4 lhx4 LOC101173475 LOC101173475 LOC101155648 LOC101155648 LOC101158766 LOC101158766 LOC101161061 LOC101161061 H2MJD0_ORYLA H2MJD0_ORYLA vldlr vldlr LOC101163758 LOC101163758 plxna4 plxna4 fgfr1 fgfr1 sirt1 sirt1 chd7 chd7 bmp4 bmp4 gpr37 gpr37 disc1 disc1 GNRHR GNRHR epha5 epha5 Sox2 Sox2 psap psap PLXND1 PLXND1 LOC101167065 LOC101167065 foxg1 foxg1 esyt2 esyt2 LOC101159664 LOC101159664 pax6 pax6 fgfr1op2 fgfr1op2 sema3e sema3e pcsk1 pcsk1 sox9 sox9 PLXNA2 PLXNA2 cbl cbl LOC101158882 LOC101158882 sema7a sema7a LOC101164509 LOC101164509 tacr3 tacr3 HGFAC HGFAC gnrh3 gnrh3 SEMA4D SEMA4D CCK CCK nipbl nipbl gas6 gas6 LOC101171145 LOC101171145 klb klb stat3 stat3 sp8 sp8 LOC101163082 LOC101163082 kl kl dmxl2 dmxl2 pik3r1 pik3r1 sox2 sox2 znf609 znf609 Fgf1 Fgf1 spry4 spry4 LOC101162124 LOC101162124 fgf19 fgf19 cttn cttn
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
frs2Fibroblast growth factor receptor substrate 2b. (526 aa)
LOC101158476Cbl proto-oncogene C, E3 ubiquitin protein ligase. (557 aa)
stub1STIP1 homology and U-Box containing protein 1. (284 aa)
fgf8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
hdac6Histone deacetylase 6. (1073 aa)
NTN1Netrin 1. (603 aa)
gab1GRB2-associated binding protein 1. (795 aa)
crbnCereblon. (447 aa)
LOC101166404Olfactory marker protein a. (166 aa)
fgf18Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
LOC101160359Netrin 2. (630 aa)
ccdc141Uncharacterized protein. (2093 aa)
sema3aSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (796 aa)
wnt1Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (398 aa)
plxna3Plexin A3. (1895 aa)
prok2Prokineticin 2. (131 aa)
robo1Roundabout, axon guidance receptor, homolog 1 (Drosophila). (1713 aa)
anos1Uncharacterized protein. (696 aa)
sox10SRY-box containing gene 10b. (484 aa)
egfEpidermal growth factor. (966 aa)
flrt3Fibronectin leucine rich transmembrane 3. (650 aa)
LOC100049444C-X-C motif chemokine receptor 4; Belongs to the G-protein coupled receptor 1 family. (375 aa)
ENSORLP00000032832BHLH domain-containing protein. (199 aa)
Nedd4Uncharacterized protein. (403 aa)
rnf216Ring finger protein 216. (1027 aa)
polr3aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1402 aa)
tac3Tachykinin 3. (123 aa)
LOC101168414Empty spiracles homeobox 1. (233 aa)
plcg11-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1311 aa)
plxnc1Plexin C1. (1555 aa)
emx2Empty spiracles homeobox 2. (332 aa)
neurod1Neurogenic differentiation factor. (350 aa)
pax3Paired box 3b. (496 aa)
LOC101155983Patatin-like phospholipase domain containing 6. (1384 aa)
dccDCC netrin 1 receptor. (1501 aa)
dcxUncharacterized protein. (350 aa)
fshbCys_knot domain-containing protein. (135 aa)
lrit3Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a. (631 aa)
neurog1Neurogenin 1. (195 aa)
LOC101169677FEZ family zinc finger 1. (423 aa)
dusp6Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
fgfr1opFOP_dimer domain-containing protein. (405 aa)
sp9Sp9 transcription factor. (439 aa)
il17rdInterleukin 17 receptor D. (809 aa)
lhx4LIM homeobox 4. (389 aa)
LOC101173475Unc-5 netrin receptor Db. (952 aa)
LOC101155648Hematopoietic cell-specific Lyn substrate 1. (470 aa)
LOC101158766Plexin A2. (1962 aa)
LOC101161061Netrin 1b. (601 aa)
H2MJD0_ORYLAOlfactory marker protein b. (162 aa)
vldlrVery low density lipoprotein receptor. (847 aa)
LOC101163758Uncharacterized protein. (852 aa)
plxna4Plexin A4. (1917 aa)
fgfr1Fibroblast growth factor receptor. (833 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
chd7Chromodomain helicase DNA binding protein 7. (3307 aa)
bmp4Bone morphogenetic protein 4. (441 aa)
gpr37G protein-coupled receptor 37b. (617 aa)
disc1DISC1 scaffold protein. (814 aa)
GNRHRGonadotropin releasing hormone receptor. (435 aa)
epha5Uncharacterized protein. (1007 aa)
Sox2SRY-box transcription factor 2. (243 aa)
psapProsaposin; Prosaposin: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling. (532 aa)
PLXND1Plexin D1. (1918 aa)
LOC101167065Fibronectin leucine rich transmembrane protein 1. (685 aa)
foxg1Fork-head domain-containing protein. (461 aa)
esyt2Extended synaptotagmin-like protein 2b. (837 aa)
LOC101159664Plexin b1b. (2110 aa)
pax6Paired box protein Pax-6; May be a transcription factor with important functions in eye and nasal development; Belongs to the paired homeobox family. (457 aa)
fgfr1op2FGFR1 oncogene partner 2. (215 aa)
sema3eSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family. (791 aa)
pcsk1Proprotein convertase subtilisin/kexin type 1; Belongs to the peptidase S8 family. (765 aa)
sox9HMG box domain-containing protein. (476 aa)
PLXNA2Plexin A2. (1911 aa)
cblCbl proto-oncogene, E3 ubiquitin protein ligase. (946 aa)
LOC101158882Sp8 transcription factor b. (479 aa)
sema7aSemaphorin 7A; Belongs to the semaphorin family. (525 aa)
LOC101164509Netrin 5. (810 aa)
tacr3Tachykinin receptor 3a; Belongs to the G-protein coupled receptor 1 family. (412 aa)
HGFACHGF activator. (602 aa)
gnrh3GnRH-associated peptide 3; Stimulates the secretion of gonadotropins. Belongs to the GnRH family. (90 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (903 aa)
CCKCholecystokinin. (138 aa)
nipblNipped-B protein. (2335 aa)
gas6Growth arrest-specific 6. (684 aa)
LOC101171145Sprouty RTK signaling antagonist 2. (342 aa)
klbKlotho beta. (1045 aa)
stat3Signal transducer and activator of transcription. (785 aa)
sp8Uncharacterized protein. (458 aa)
LOC101163082Signal transducer and activator of transcription. (786 aa)
klKlotho. (975 aa)
dmxl2Dmx-like 2. (2919 aa)
pik3r1Phosphoinositide-3-kinase, regulatory subunit 1 (alpha). (728 aa)
sox2SOX3 protein. (300 aa)
znf609Zinc finger protein 609b. (1374 aa)
Fgf1Multifunctional fusion protein; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with integr [...] (159 aa)
spry4Sprouty homolog 4 (Drosophila). (378 aa)
LOC101162124Plexin b1a. (2215 aa)
fgf19Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
cttnCortactin. (497 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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