STRINGSTRING
LOC101170939 LOC101170939 gsdf gsdf fshr fshr wt1-2 wt1-2 ddx4 ddx4 dnd1 dnd1 coll coll LOC100049338 LOC100049338 tgfb3 tgfb3 nr5a1 nr5a1 wt1 wt1 nanos3 nanos3 nanos2 nanos2 LOC101155815 LOC101155815 3bhsd 3bhsd gdnf gdnf eef1a eef1a LOC101157631 LOC101157631 LOC101155037 LOC101155037
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101170939Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (462 aa)
gsdfGonadal soma derived factor. (216 aa)
fshrThyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. (687 aa)
wt1-2Uncharacterized protein. (418 aa)
ddx4Uncharacterized protein; Belongs to the DEAD box helicase family. (727 aa)
dnd1Dead end protein. (372 aa)
collCollagenase. (470 aa)
LOC100049338Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (456 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
nr5a1FTZ-F1. (486 aa)
wt1Uncharacterized protein. (435 aa)
nanos3NANOS3; Belongs to the nanos family. (201 aa)
nanos2Nanos-type domain-containing protein; Belongs to the nanos family. (155 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
3bhsd3Beta_HSD domain-containing protein; Belongs to the 3-beta-HSD family. (374 aa)
gdnfGlial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. (265 aa)
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (461 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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