STRINGSTRING
LOC101168538 LOC101168538 notch1 notch1 traf6 traf6 LOC101157631 LOC101157631 neu1 neu1 LOC101155037 LOC101155037 LOC101169415 LOC101169415 aoc1 aoc1 stat3 stat3 LOC101168781 LOC101168781 LOC101170426 LOC101170426 mvk mvk eef1a eef1a LOC101155815 LOC101155815 LOC101168921 LOC101168921 mvd mvd mogat2 mogat2 srf srf acat2 acat2 LOC101170748 LOC101170748 LOC101169721 LOC101169721 tgfb3 tgfb3 LOC100125499 LOC100125499 LOC101165526 LOC101165526 il17rd il17rd H2N0C8_ORYLA H2N0C8_ORYLA LOC101162393 LOC101162393 sox7 sox7 il-17a/f-1 il-17a/f-1 actb actb hmgcs1 hmgcs1 pla2g1b pla2g1b LOC105358811 LOC105358811 Cxcl13 Cxcl13 ENSORLP00000034044 ENSORLP00000034044 il17rb il17rb LOC101172927 LOC101172927 PLA2G12B PLA2G12B il17rc il17rc il17re il17re s100a1 s100a1 fli1 fli1 man2b1 man2b1 LOC101161188 LOC101161188 il-17n il-17n il-17a/f-2 il-17a/f-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101168538Elastase 2; Belongs to the peptidase S1 family. (266 aa)
notch1Notch receptor 1b. (2507 aa)
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
neu1Sialidase 1. (393 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
LOC101169415UTP--glucose-1-phosphate uridylyltransferase. (504 aa)
aoc1Amine oxidase. (742 aa)
stat3Signal transducer and activator of transcription. (785 aa)
LOC101168781Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (266 aa)
LOC101170426Pyruvate kinase; Belongs to the pyruvate kinase family. (530 aa)
mvkMevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (396 aa)
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (461 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
mvdDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (396 aa)
mogat2Monoacylglycerol O-acyltransferase 2. (335 aa)
srfSerum response factor b. (611 aa)
acat2Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
LOC101170748Pyruvate kinase; Belongs to the pyruvate kinase family. (550 aa)
LOC101169721Apolipoprotein A-Ib. (323 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
LOC1001254993-hydroxy-3-methylglutaryl coenzyme A reductase. (865 aa)
LOC101165526Cathepsin Bb; Belongs to the peptidase C1 family. (330 aa)
il17rdInterleukin 17 receptor D. (809 aa)
H2N0C8_ORYLACytochrome P450, family 51; Belongs to the cytochrome P450 family. (200 aa)
LOC101162393Phospholipase A2, group XIIB. (286 aa)
sox7Uncharacterized protein. (407 aa)
il-17a/f-1Interleukin-17A/F-1. (152 aa)
actbActin, cytoplasmic 1. (434 aa)
hmgcs13-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (513 aa)
pla2g1bPhospholipase A(2). (149 aa)
LOC105358811MADS-box domain-containing protein. (552 aa)
Cxcl13SCY domain-containing protein. (91 aa)
ENSORLP00000034044Interleukin; Belongs to the IL-15/IL-21 family. (168 aa)
il17rbSEFIR domain-containing protein. (434 aa)
LOC101172927RAR-related orphan receptor C. (532 aa)
PLA2G12BPhospholipase A2 group XIIB. (214 aa)
il17rcSEFIR domain-containing protein. (703 aa)
il17reUncharacterized protein. (781 aa)
s100a1Protein S100; Belongs to the S-100 family. (99 aa)
fli1Fli-1 proto-oncogene, ETS transcription factor a. (458 aa)
man2b1Alpha-mannosidase. (998 aa)
LOC101161188Pyruvate kinase; Belongs to the pyruvate kinase family. (543 aa)
il-17nUncharacterized protein. (206 aa)
il-17a/f-2Uncharacterized protein. (183 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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