21 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sod2	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (226 aa)
	casp9	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (438 aa)
	LOC101156378	Uncharacterized protein; Belongs to the peptidase C14A family. (287 aa)
	gapdh	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	c-fos	BZIP domain-containing protein. (376 aa)
	ENSORLP00000032968	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (287 aa)
	LOC101167730	Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
	LOC101162522	Uncharacterized protein. (473 aa)
	LOC101167759	Si:ch211-153j24.3. (371 aa)
	LOC101165186	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. (378 aa)
	bmp4	Bone morphogenetic protein 4. (441 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	shh	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (414 aa)
	jun	BZIP domain-containing protein; Belongs to the bZIP family. (306 aa)
	casp3	Uncharacterized protein; Belongs to the peptidase C14A family. (290 aa)
	JUND	BZIP domain-containing protein. (296 aa)
	LOC100049265	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (265 aa)
	LOC101169635	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (663 aa)
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	pax7	Uncharacterized protein. (524 aa)
	keap1	Kelch-like ECH-associated protein 1b. (621 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000032968	JUND	ENSORLP00000032968	ENSORLP00000010525	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	BZIP domain-containing protein.	0.731
ENSORLP00000032968	LOC101165186	ENSORLP00000032968	ENSORLP00000020668	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	0.992
ENSORLP00000032968	LOC101167759	ENSORLP00000032968	ENSORLP00000021887	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	Si:ch211-153j24.3.	0.991
ENSORLP00000032968	c-fos	ENSORLP00000032968	ENSORLP00000037119	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	BZIP domain-containing protein.	0.999
ENSORLP00000032968	jun	ENSORLP00000032968	ENSORLP00000012661	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	BZIP domain-containing protein; Belongs to the bZIP family.	0.902
JUND	ENSORLP00000032968	ENSORLP00000010525	ENSORLP00000032968	BZIP domain-containing protein.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.731
JUND	LOC101165186	ENSORLP00000010525	ENSORLP00000020668	BZIP domain-containing protein.	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	0.779
JUND	LOC101167759	ENSORLP00000010525	ENSORLP00000021887	BZIP domain-containing protein.	Si:ch211-153j24.3.	0.727
JUND	c-fos	ENSORLP00000010525	ENSORLP00000037119	BZIP domain-containing protein.	BZIP domain-containing protein.	0.923
LOC100049265	casp3	ENSORLP00000010098	ENSORLP00000010793	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.902
LOC100049265	casp9	ENSORLP00000010098	ENSORLP00000040536	Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.970
LOC101156378	casp9	ENSORLP00000040113	ENSORLP00000040536	Uncharacterized protein; Belongs to the peptidase C14A family.	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.	0.974
LOC101162522	LOC101165186	ENSORLP00000026706	ENSORLP00000020668	Uncharacterized protein.	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	0.495
LOC101162522	LOC101167759	ENSORLP00000026706	ENSORLP00000021887	Uncharacterized protein.	Si:ch211-153j24.3.	0.502
LOC101165186	ENSORLP00000032968	ENSORLP00000020668	ENSORLP00000032968	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.	0.992
LOC101165186	JUND	ENSORLP00000020668	ENSORLP00000010525	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	BZIP domain-containing protein.	0.779
LOC101165186	LOC101162522	ENSORLP00000020668	ENSORLP00000026706	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	Uncharacterized protein.	0.495
LOC101165186	LOC101167759	ENSORLP00000020668	ENSORLP00000021887	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	Si:ch211-153j24.3.	0.940
LOC101165186	c-fos	ENSORLP00000020668	ENSORLP00000037119	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	BZIP domain-containing protein.	0.906
LOC101165186	jun	ENSORLP00000020668	ENSORLP00000012661	V-fos FBJ murine osteosarcoma viral oncogene homolog Aa.	BZIP domain-containing protein; Belongs to the bZIP family.	0.959