11 items (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nr3c1	Glucocorticoid receptor GR1a. (793 aa)
	LOC101166339	Peptidase S1 domain-containing protein. (333 aa)
	LOC101168921	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
	LOC101167730	Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
	asic1	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. (556 aa)
	nr3c2	Mineralocorticoid receptor. (994 aa)
	actb	Actin, cytoplasmic 1. (434 aa)
	gapdh	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	LOC101161698	Peptidase S1 domain-containing protein. (368 aa)
	H2LQ87_ORYLA	Si:dkey-32n7.7; Belongs to the peptidase S1 family. (299 aa)
	LOC100302444	Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (790 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2LQ87_ORYLA	asic1	ENSORLP00000008225	ENSORLP00000030119	Si:dkey-32n7.7; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.	0.435
LOC100302444	nr3c1	ENSORLP00000007570	ENSORLP00000001939	Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).	Glucocorticoid receptor GR1a.	0.903
LOC100302444	nr3c2	ENSORLP00000007570	ENSORLP00000030936	Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).	Mineralocorticoid receptor.	0.821
LOC101161698	asic1	ENSORLP00000045238	ENSORLP00000030119	Peptidase S1 domain-containing protein.	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.	0.435
LOC101166339	asic1	ENSORLP00000010641	ENSORLP00000030119	Peptidase S1 domain-containing protein.	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.	0.435
LOC101167730	LOC101168921	ENSORLP00000028200	ENSORLP00000011676	Glyceraldehyde-3-phosphate dehydrogenase.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.672
LOC101167730	actb	ENSORLP00000028200	ENSORLP00000031145	Glyceraldehyde-3-phosphate dehydrogenase.	Actin, cytoplasmic 1.	0.672
LOC101167730	gapdh	ENSORLP00000028200	ENSORLP00000038395	Glyceraldehyde-3-phosphate dehydrogenase.	Glyceraldehyde-3-phosphate dehydrogenase.	0.934
LOC101168921	LOC101167730	ENSORLP00000011676	ENSORLP00000028200	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Glyceraldehyde-3-phosphate dehydrogenase.	0.672
LOC101168921	gapdh	ENSORLP00000011676	ENSORLP00000038395	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Glyceraldehyde-3-phosphate dehydrogenase.	0.841
LOC101168921	nr3c1	ENSORLP00000011676	ENSORLP00000001939	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	Glucocorticoid receptor GR1a.	0.408
actb	LOC101167730	ENSORLP00000031145	ENSORLP00000028200	Actin, cytoplasmic 1.	Glyceraldehyde-3-phosphate dehydrogenase.	0.672
actb	gapdh	ENSORLP00000031145	ENSORLP00000038395	Actin, cytoplasmic 1.	Glyceraldehyde-3-phosphate dehydrogenase.	0.841
actb	nr3c1	ENSORLP00000031145	ENSORLP00000001939	Actin, cytoplasmic 1.	Glucocorticoid receptor GR1a.	0.408
asic1	H2LQ87_ORYLA	ENSORLP00000030119	ENSORLP00000008225	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.	Si:dkey-32n7.7; Belongs to the peptidase S1 family.	0.435
asic1	LOC101161698	ENSORLP00000030119	ENSORLP00000045238	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.	Peptidase S1 domain-containing protein.	0.435
asic1	LOC101166339	ENSORLP00000030119	ENSORLP00000010641	Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.	Peptidase S1 domain-containing protein.	0.435
gapdh	LOC101167730	ENSORLP00000038395	ENSORLP00000028200	Glyceraldehyde-3-phosphate dehydrogenase.	Glyceraldehyde-3-phosphate dehydrogenase.	0.934
gapdh	LOC101168921	ENSORLP00000038395	ENSORLP00000011676	Glyceraldehyde-3-phosphate dehydrogenase.	Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA.	0.841
gapdh	actb	ENSORLP00000038395	ENSORLP00000031145	Glyceraldehyde-3-phosphate dehydrogenase.	Actin, cytoplasmic 1.	0.841