STRINGSTRING
itgb6 itgb6 itgb3 itgb3 SRC SRC eef1a eef1a scai scai lats1 lats1 LOC101155571 LOC101155571 itgb5 itgb5 ENSORLP00000045626 ENSORLP00000045626 LOC101164480 LOC101164480 itgb4 itgb4 gapdh gapdh H2L736_ORYLA H2L736_ORYLA LOC101154978 LOC101154978 itgb1 itgb1 LOC101168465 LOC101168465 itgb8 itgb8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
itgb6Integrin beta; Belongs to the integrin beta chain family. (757 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (795 aa)
SRCTyrosine-protein kinase. (544 aa)
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (461 aa)
scaiSuppressor of cancer cell invasion. (566 aa)
lats1Large tumor suppressor kinase 1. (1063 aa)
LOC101155571Histone H2B; Belongs to the histone H2B family. (124 aa)
itgb5Integrin beta; Belongs to the integrin beta chain family. (827 aa)
ENSORLP00000045626Histone H2B; Belongs to the histone H2B family. (199 aa)
LOC101164480Tyrosine-protein kinase. (551 aa)
itgb4Integrin beta. (1912 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
H2L736_ORYLAHistone H2B; Belongs to the histone H2B family. (132 aa)
LOC101154978Integrin beta; Belongs to the integrin beta chain family. (793 aa)
itgb1Integrin beta; Belongs to the integrin beta chain family. (808 aa)
LOC101168465Integrin beta; Belongs to the integrin beta chain family. (754 aa)
itgb8Integrin beta; Belongs to the integrin beta chain family. (745 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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