Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC101155815 | tgfb3 | ENSORLP00000011426 | ENSORLP00000020737 | Transforming growth factor beta; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.901 |
| LOC101161140 | esr1 | ENSORLP00000037370 | ENSORLP00000042539 | Vitellogenin 3, phosvitinless. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.837 |
| LOC101166143 | esr1 | ENSORLP00000042760 | ENSORLP00000042539 | Growth differentiation factor 9. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.550 |
| LOC101166143 | sox9 | ENSORLP00000042760 | ENSORLP00000009985 | Growth differentiation factor 9. | HMG box domain-containing protein. | 0.503 |
| LOC101166988 | crh | ENSORLP00000008562 | ENSORLP00000010676 | CRF domain-containing protein. | Corticotropin-releasing hormone. | 0.906 |
| crh | LOC101166988 | ENSORLP00000010676 | ENSORLP00000008562 | Corticotropin-releasing hormone. | CRF domain-containing protein. | 0.906 |
| e2f4 | smad3 | ENSORLP00000019667 | ENSORLP00000008548 | E2F transcription factor 4. | Mothers against decapentaplegic homolog. | 0.487 |
| esr1 | LOC101161140 | ENSORLP00000042539 | ENSORLP00000037370 | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | Vitellogenin 3, phosvitinless. | 0.837 |
| esr1 | LOC101166143 | ENSORLP00000042539 | ENSORLP00000042760 | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | Growth differentiation factor 9. | 0.550 |
| esr1 | sox9 | ENSORLP00000042539 | ENSORLP00000009985 | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | HMG box domain-containing protein. | 0.454 |
| esr1 | tp53 | ENSORLP00000042539 | ENSORLP00000008031 | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.656 |
| foxo1 | smad3 | ENSORLP00000043876 | ENSORLP00000008548 | Fork-head domain-containing protein. | Mothers against decapentaplegic homolog. | 0.554 |
| foxo1 | tp53 | ENSORLP00000043876 | ENSORLP00000008031 | Fork-head domain-containing protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.603 |
| smad3 | e2f4 | ENSORLP00000008548 | ENSORLP00000019667 | Mothers against decapentaplegic homolog. | E2F transcription factor 4. | 0.487 |
| smad3 | foxo1 | ENSORLP00000008548 | ENSORLP00000043876 | Mothers against decapentaplegic homolog. | Fork-head domain-containing protein. | 0.554 |
| smad3 | tp53 | ENSORLP00000008548 | ENSORLP00000008031 | Mothers against decapentaplegic homolog. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | 0.547 |
| sox9 | LOC101166143 | ENSORLP00000009985 | ENSORLP00000042760 | HMG box domain-containing protein. | Growth differentiation factor 9. | 0.503 |
| sox9 | esr1 | ENSORLP00000009985 | ENSORLP00000042539 | HMG box domain-containing protein. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.454 |
| tgfb3 | LOC101155815 | ENSORLP00000020737 | ENSORLP00000011426 | Transforming growth factor beta; Belongs to the TGF-beta family. | Transforming growth factor beta; Belongs to the TGF-beta family. | 0.901 |
| tp53 | esr1 | ENSORLP00000008031 | ENSORLP00000042539 | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression (By similarity); Belongs to the p53 family. | Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. | 0.656 |
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