STRINGSTRING
irs2 irs2 LOC101163560 LOC101163560 igf2bp3 igf2bp3 pik3c3 pik3c3 LOC101164480 LOC101164480 SRC SRC actb actb LOC101168921 LOC101168921
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
irs2Insulin receptor substrate 2b. (1081 aa)
LOC101163560Tyrosine-protein kinase receptor. (1405 aa)
igf2bp3Insulin-like growth factor 2 mRNA binding protein 3. (609 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
LOC101164480Tyrosine-protein kinase. (551 aa)
SRCTyrosine-protein kinase. (544 aa)
actbActin, cytoplasmic 1. (434 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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