STRINGSTRING
LOC101157631 LOC101157631 LOC101162601 LOC101162601 LOC101155037 LOC101155037 amh amh ncoa5 ncoa5 LOC101155815 LOC101155815 LOC101168921 LOC101168921 tgfb3 tgfb3 foxl2 foxl2 dmy dmy dnd1 dnd1 actb actb piwil1 piwil1 myc myc rora rora gsdf gsdf esr1 esr1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
LOC101162601Uncharacterized protein. (1124 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
amhAnti-muellerian hormone. (496 aa)
ncoa5Nuclear receptor coactivator 5. (621 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
LOC101168921Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (410 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
foxl2Forkhead box L2. (306 aa)
dmyDoublesex- and mab-3-related transcription factor 1; Transcription factor that acts both as a transcription. (283 aa)
dnd1Dead end protein. (372 aa)
actbActin, cytoplasmic 1. (434 aa)
piwil1Uncharacterized protein; Belongs to the argonaute family. (1185 aa)
mycBHLH domain-containing protein. (527 aa)
roraRAR-related orphan receptor A, paralog a. (531 aa)
gsdfGonadal soma derived factor. (216 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (634 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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