STRINGSTRING
st8sia2 st8sia2 lipg lipg Ccr7 Ccr7 CMAS CMAS LOC101155571 LOC101155571 siglec15 siglec15 LOC101155571-2 LOC101155571-2 slc17a5 slc17a5 LOC101155571-3 LOC101155571-3 LOC101155571-4 LOC101155571-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
st8sia2ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2; Belongs to the glycosyltransferase 29 family. (376 aa)
lipgLipase, endothelial. (507 aa)
Ccr7Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (407 aa)
CMASCytidine monophosphate N-acetylneuraminic acid synthetase. (533 aa)
LOC101155571Histone H2B; Belongs to the histone H2B family. (124 aa)
siglec15Uncharacterized protein. (289 aa)
LOC101155571-2Histone H2B 1/2. (124 aa)
slc17a5Solute carrier family 17 member 5. (492 aa)
LOC101155571-3Histone H2B 1/2. (124 aa)
LOC101155571-4Histone H2B 1/2. (124 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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