STRINGSTRING
gpx1 gpx1 LOC101161096 LOC101161096 sod2 sod2 GPX4 GPX4 LOC100049397 LOC100049397 gpx3 gpx3 gpx8 gpx8 gpx7 gpx7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (184 aa)
LOC101161096Glutathione peroxidase; Belongs to the glutathione peroxidase family. (128 aa)
sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (226 aa)
GPX4Glutathione peroxidase; Belongs to the glutathione peroxidase family. (207 aa)
LOC100049397Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals; Belongs to the metallothionein superfamily. Type 1 family. (60 aa)
gpx3Glutathione peroxidase; Belongs to the glutathione peroxidase family. (173 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
gpx7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (185 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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