STRINGSTRING
LOC100529176 LOC100529176 LOC101166988 LOC101166988 crh crh lrp5 lrp5 col10a1 col10a1 Tg Tg gpr158 gpr158 esr1 esr1 foxo1 foxo1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100529176Collagen, type X, alpha 1a. (643 aa)
LOC101166988CRF domain-containing protein. (143 aa)
crhCorticotropin-releasing hormone. (163 aa)
lrp5Low density lipoprotein receptor-related protein 5. (1634 aa)
col10a1Collagen, type X, alpha 1b. (656 aa)
TgCOesterase domain-containing protein. (315 aa)
gpr158G protein-coupled receptor 158a. (1343 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (634 aa)
foxo1Fork-head domain-containing protein. (655 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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