STRINGSTRING
TKT TKT rpe rpe gapdh gapdh xylb xylb rpia rpia LOC101167730 LOC101167730 LOC101165489 LOC101165489
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
TKTTransketolase. (628 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (250 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
xylbXylulokinase homolog (H. influenzae). (556 aa)
rpiaRibose 5-phosphate isomerase A (ribose 5-phosphate epimerase). (271 aa)
LOC101167730Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
LOC101165489Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis. (248 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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