STRINGSTRING
pparg pparg LOC101164480 LOC101164480 LOC101170687 LOC101170687 sost sost LOC101165175 LOC101165175 LOC101164922 LOC101164922 sirt1 sirt1 LOC101158728 LOC101158728 ggcx ggcx SRC SRC SEMA4D SEMA4D tcirg1 tcirg1 ctss ctss esr1 esr1 mgp mgp sema3a sema3a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ppargUncharacterized protein. (549 aa)
LOC101164480Tyrosine-protein kinase. (551 aa)
LOC101170687Slit homolog 3 (Drosophila). (1538 aa)
sostSclerostin. (219 aa)
LOC101165175Cathepsin S, ortholog2, tandem duplicate 1; Belongs to the peptidase C1 family. (339 aa)
LOC101164922Cathepsin K; Belongs to the peptidase C1 family. (331 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
LOC101158728V-rel avian reticuloendotheliosis viral oncogene homolog A. (617 aa)
ggcxGamma-glutamyl carboxylase. (764 aa)
SRCTyrosine-protein kinase. (544 aa)
SEMA4DSemaphorin 4D; Belongs to the semaphorin family. (903 aa)
tcirg1V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (830 aa)
ctssCathepsin S; Belongs to the peptidase C1 family. (327 aa)
esr1Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (634 aa)
mgpGla domain-containing protein. (122 aa)
sema3aSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab; Belongs to the semaphorin family. (796 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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